NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.
☆34Aug 19, 2021Updated 4 years ago
Alternatives and similar repositories for NeatMS
Users that are interested in NeatMS are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A bioinformatic tool facilitating automated in-source fragmentation identification☆10Sep 6, 2022Updated 3 years ago
- MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.☆18Nov 14, 2023Updated 2 years ago
- ☆12Jul 10, 2022Updated 3 years ago
- ☆11Mar 20, 2026Updated last week
- metabCombiner R Package: Paired Untargeted Metabolomics Feature Matching & Data Concatenation☆13May 29, 2024Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery☆51Aug 28, 2023Updated 2 years ago
- data processing for MS-based metabolomics☆15Nov 10, 2024Updated last year
- Dashboard for analysis of liquid chromatography (tandem) mass spectrometry data.☆33Jan 29, 2026Updated 2 months ago
- ☆121Apr 8, 2023Updated 2 years ago
- Ms2 basEd saMple vectOrization (memo) package☆17Jun 13, 2023Updated 2 years ago
- ☆16Jul 20, 2022Updated 3 years ago
- A package to cluster and visualise MS/MS spectral data☆11Feb 26, 2021Updated 5 years ago
- metabolite identification R-package for metabolomic high-resolution LC-MS datasets.☆16Apr 19, 2017Updated 8 years ago
- A Pipeline for LC-MS/MS Metabolomics Data Process and Analysis☆15Feb 27, 2026Updated last month
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Peak detection for untargeted metabolomics using Neural Network. High-level API based on peakonly by @Arseha.☆17Feb 28, 2026Updated last month
- On-instrument and post-acquisition targeted feature extraction☆13Sep 27, 2025Updated 6 months ago
- ☆37Mar 16, 2026Updated last week
- ☆11Feb 20, 2026Updated last month
- This repo contains the code needed to run the R package Autotuner. Autotuner is used to identify proper parameters during metabolomics da…☆16Jan 21, 2021Updated 5 years ago
- Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets☆13Mar 18, 2026Updated last week
- a *biosynformatic* fingerprint to explore natural product distance and diversity☆21Aug 30, 2025Updated 6 months ago
- TidyMS: Tools for working with MS data in untargeted metabolomics☆61Jul 13, 2024Updated last year
- R package for MetFrag☆24Sep 25, 2017Updated 8 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Scalable and self-optimizing processing workflow for untargeted LC-MS☆31Aug 3, 2024Updated last year
- Python pipeline for metabolomics data preprocessing, QC, standardization and annotation☆16Updated this week
- PeakBot - detection of chromatographic and mz profile-mode peaks in LC-HRMS data☆22Feb 9, 2022Updated 4 years ago
- A point cloud based deep learning model for untargeted feature detection and quantification in profile LC-HRMS data☆28Aug 28, 2023Updated 2 years ago
- https://taxonomicallyinformedannotation.github.io/tima☆12Updated this week
- The nPYc-Toolbox defines objects for representing, and implements functions to manipulate and display, metabolic profiling datasets.☆25Aug 8, 2025Updated 7 months ago
- A known-to-unknown metabolite identification workflow☆21Sep 15, 2020Updated 5 years ago
- Single sample pathway analysis tools for omics data☆13Nov 9, 2024Updated last year
- Implementation of a deep learning model for peak detection in chromatograms.☆22Mar 22, 2022Updated 4 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Flash entropy search☆16Sep 24, 2023Updated 2 years ago
- A declarative API for writing XML documents for HUPO PSI-MS mzML and mzIdentML☆22Jan 19, 2025Updated last year
- a python package for molecular formula analysis in MS-based small molecule studies☆33Jan 28, 2026Updated 2 months ago
- Relaunch of the initial MetFrag project.☆19Mar 9, 2026Updated 2 weeks ago
- Tool for reliability assessment of omics peprocessing☆11Jan 13, 2026Updated 2 months ago
- The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …☆56Mar 18, 2026Updated last week
- Annotation of in source LC/MS data☆12Oct 19, 2024Updated last year