Alternatives and similar repositories for RepoRT

Users that are interested in RepoRT are comparing it to the libraries listed below

• biosustain / pyOpenMS_UmetaFlow
  Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)
  ☆24Updated last year
• matchms / ms2deepscore
  Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity
  ☆71Updated this week
• zhanghailiangcsu / MSBERT
  Improve the accuracy of database search by using BERT to embed MS/MS reasonably
  ☆19Updated last year
• XiminHu / mass-suite
  ☆29Updated last year
• pnnl / deimos
  ☆37Updated last month
• merlin-ms / awesome-mass-spectral-libraries
  ☆22Updated 4 months ago
• samgoldman97 / mist
  Encoding MS/MS spectra using formula transformers for inferring molecular properties
  ☆72Updated last year
• pnnl / darkchem
  ☆33Updated last year
• HuanLab / BUDDY
  Bottom-up MS/MS interrogation & Experiment-specific global annotation
  ☆30Updated last year
• Philipbear / msbuddy
  a python package for molecular formula analysis in MS-based small molecule studies
  ☆32Updated last week
• skinniderlab / CLM
  ☆17Updated this week
• meowcat / MSNovelist
  ☆72Updated last year
• griquelme / tidyms
  TidyMS: Tools for working with MS data in untargeted metabolomics
  ☆60Updated last year
• murphy17 / graff-ms
  Efficiently predicting high resolution mass spectra with graph neural networks
  ☆32Updated 2 years ago
• YuanyueLi / MSEntropy
  Spectral entropy for mass spectrometry data.
  ☆34Updated last month
• sirius-ms / sirius
  SIRIUS is a software for discovering a landscape of de-novo identification of metabolites using tandem mass spectrometry. This repository…
  ☆136Updated 2 months ago
• pnnl / MSAC
  ☆23Updated 10 months ago
• bittremieuxlab / falcon
  Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.
  ☆33Updated last month
• JamesJeffryes / pyclassyfire
  A python client for the ClassyFire API
  ☆17Updated 5 years ago
• sirius-ms / sirius-client-openAPI
  OpenAPI based libraries for different programming languages like R and Python
  ☆18Updated last week
• hcji / DeepEI
  Predicting molecular fingerprint from electron−ionization mass spectrum with deep neural networks
  ☆36Updated last year
• bihealth / NeatMS
  NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.
  ☆34Updated 4 years ago
• idslme / IDSL_MINT
  A Deep Learning Framework to Interpret Raw Mass Spectrometry (m/z) Data
  ☆26Updated 2 years ago
• mwang87 / NP-Classifier
  ☆27Updated 3 weeks ago
• YuanyueLi / FlashEntropySearch
  Flash entropy search
  ☆16Updated 2 years ago
• mobiusklein / brainpy
  A Python implementation of Baffling Recursive Algorithm for Isotopic distributioN calculations
  ☆23Updated 8 months ago
• BAMeScience / fiora
  Meet FIORA! An in silico fragmentation algorithm designed to predict tandem mass spectra (MS/MS) with high accuracy. Using graph neural n…
  ☆47Updated 3 months ago
• mobiusklein / ms_peak_picker
  A small library to provide peak picking for software processing mass spectrometry data
  ☆23Updated last year
• computational-metabolomics / msPurity
  A Bioconductor R package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics
  ☆16Updated last year
• KavrakiLab / Spec2Mol
  ☆28Updated 2 years ago