Alternatives and similar repositories for paper_multiPGS:

Users that are interested in paper_multiPGS are comparing it to the libraries listed below

• wuyangf7 / OPERA
  This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…
  ☆33Updated 4 months ago
• huwenboshi / hess
  Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.
  ☆41Updated 6 years ago
• psoerensen / qgg
  Statistical tools for Quantitative Genetic Analyses
  ☆35Updated 3 weeks ago
• yiminghu / post-GWAS-pipeline
  A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data
  ☆28Updated 2 years ago
• clagiamba / moloc
  ☆34Updated 4 years ago
• bogdanlab / focus
  FOCUS: Fine-mapping Of CaUsal gene Sets
  ☆44Updated last year
• opain / eQTL_to_TWAS
  Methods for converting eQTL summary statistics into TWAS SNP-weights
  ☆13Updated 9 months ago
• douglasyao / mesc
  Mediated Expression Score Regression (MESC)
  ☆26Updated 2 years ago
• brielin / Popcorn
  Software for estimating correlation of trait effect sizes across populations
  ☆42Updated 2 years ago
• xihaoli / MetaSTAAR
  An R package for performing MetaSTAAR procedure in whole-genome sequencing studies
  ☆22Updated 2 months ago
• EmilMiP / LTFHPlus
  Implementation of LTFH++
  ☆10Updated 7 months ago
• myles-lewis / locuszoomr
  A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.
  ☆33Updated this week
• zhilizheng / SBayesRC
  ☆27Updated 5 months ago
• thewonlab / H-MAGMA
  ☆32Updated last year
• cgrace1978 / manhplot
  Manhattan++
  ☆28Updated 11 months ago
• eQTL-Catalogue / eQTL-Catalogue-resources
  ☆46Updated 3 months ago
• xtonyjiang / GNOVA
  A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.
  ☆28Updated 7 months ago
• hakyimlab / summary-gwas-imputation
  harmonization, liftover, and imputation of summary statistics from GWAS
  ☆31Updated 4 years ago
• RitchieLab / GWAS-QC
  Quality control steps for GWAS
  ☆19Updated last year
• Annefeng / PBK-QC-pipeline
  Partners Biobank genomics data QC
  ☆25Updated 4 years ago
• xqwen / fastenloc
  Colocalization analysis of genetic association signals
  ☆50Updated 2 months ago
• jinghuazhao / TWAS-pipeline
  TWAS-pipeline
  ☆22Updated 3 years ago
• getian107 / SuSiEx
  Cross-population fine-mapping
  ☆30Updated last month
• juliedwhite / miamiplot
  An R package for creating ggplot2 based miami plots.
  ☆16Updated 10 months ago
• precimed / python_convert
  A collection of various utilities for GWAS summary statistics
  ☆26Updated 8 months ago
• cnfoley / mrclust
  R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.
  ☆14Updated 3 years ago
• cuelee / pleio
  ☆18Updated 11 months ago
• yanglab-emory / TIGAR
  ☆21Updated 2 months ago
• leelabsg / SKAT
  Sequence kernel association test (SKAT)
  ☆44Updated last year
• EBISPOT / gwas-sumstats-harmoniser
  GWAS Summary Statistics Data Harmonisation
  ☆22Updated 2 weeks ago