Alternatives and similar repositories for Awesome-Genomic-LLMs:

Users that are interested in Awesome-Genomic-LLMs are comparing it to the libraries listed below

• bhklab / PGx_Guidelines
  ☆10Updated 3 years ago
• pachterlab / gget_examples
  Examples for gget (https://github.com/pachterlab/gget).
  ☆32Updated 2 months ago
• chenhcs / DIFFUSE
  Deep learning based prediction of IsoForm FUnctions from Sequences and Expression
  ☆15Updated 3 years ago
• IxI-97 / BiomiX
  R tool to analyse and integrate multiple -omics data
  ☆8Updated 3 weeks ago
• FunctionLab / tapioca
  a framework for predicting global protein-protein interaction networks from dynamic mass spec data
  ☆24Updated last year
• mims-harvard / Madrigal
  Madrigal: Multimodal AI predicts clinical outcomes of drug combinations from preclinical data
  ☆21Updated last week
• minmarg / comer2
  Fast, sensitive and accurate protein remote homology search on GPUs
  ☆16Updated 10 months ago
• jwillis0720 / sadie
  The Complete Python Antibody Library
  ☆22Updated 8 months ago
• astrazeneca-cgr-publications / milton-release
  MILTON: Disease prediction with biomarkers and augmented PheWAS analyses
  ☆31Updated 6 months ago
• KarchinLab / HotMAPS_2016
  Detects hotspot regions for somatic mutations in 3D protein structures
  ☆2Updated last year
• tavanaei / Cancer-Suppressor-Gene-Deep-Learning
  Cancer Suppressor Gene and Oncogene Prediction using Deep Learning (CNN)
  ☆10Updated 7 years ago
• ncbi / GNorm2
  ☆19Updated last year
• CapraLab / cosmis
  COSMIS is a framework for quantifying the mutational constraint on amino acid sites in 3D spatial neighborhoods. The framework currently …
  ☆17Updated 2 years ago
• MaayanLab / maayanlab-bioinformatics
  A collection of useful functions for bioinformatics data analysis
  ☆22Updated 9 months ago
• biagent-dev / bia
  BioInformatics Agent (BIA): Unleashing the Power of Large Language Models to Reshape Bioinformatics Workflow
  ☆30Updated 7 months ago
• etirouthier / keras_dna
  ☆23Updated 4 years ago
• sinc-lab / miRe2e
  ☆14Updated last year
• altayg / Deep-Learning-MHCI
  For MHC-I protein-peptide binding predictions: Deep Learning model with CNN and Snakemake workflow
  ☆12Updated 6 years ago
• cyang235 / LncADeep
  LncADeep is an ab initio lncRNA identification and functional annotation tool based on deep learning
  ☆27Updated 6 years ago
• ai4nucleome / BioMaster
  ☆30Updated last week
• JanZrimec / DeepExpression
  ☆33Updated 2 years ago
• IntelLabs / Open-Omics-Acceleration-Framework
  Intel lab's open sourced data science framework for accelerating digital biology
  ☆44Updated last month
• IBPA / DeepPep
  Deep proteome inference from peptide profiles
  ☆13Updated 4 years ago
• vicruiser / 3Dmapper
  Map genetic variants and protein positions to protein interfaces in 3D
  ☆13Updated last year
• chembl / tractability_pipeline_v2
  Pipeline for assessing the tractability of potential targets (starting from Gene IDs)
  ☆22Updated last month
• songlab-cal / CPT
  Cross-protein transfer learning for variant effect prediction
  ☆20Updated last year
• mickaelleclercq / BioDiscML
  Large-scale automatic feature selection for biomarker discovery in high-dimensional OMICs data
  ☆29Updated 11 months ago
• ncherric / Iliad
  ILIAD: A suite of automated Snakemake workflows for processing genomic data for downstream applications
  ☆28Updated last year
• boxiangliu / covseq
  CoV-Seq: COVID-19 Genomic Sequence Database and Visualization
  ☆15Updated 4 years ago
• zuozhaorui / SWnet
  Core code for the paper "A deep learning model for drug response prediction from cancer genomic signatures and compound chemical structur…
  ☆20Updated 3 years ago