Alternatives and similar repositories for Awesome-Genomic-LLMs

Users that are interested in Awesome-Genomic-LLMs are comparing it to the libraries listed below

• FunctionLab / tapioca
  a framework for predicting global protein-protein interaction networks from dynamic mass spec data
  ☆24Updated last year
• bhklab / PGx_Guidelines
  ☆10Updated 3 years ago
• IxI-97 / BiomiX
  R tool to analyse and integrate multiple -omics data
  ☆13Updated 2 months ago
• JanZrimec / DeepExpression
  ☆33Updated 2 years ago
• tavanaei / Cancer-Suppressor-Gene-Deep-Learning
  Cancer Suppressor Gene and Oncogene Prediction using Deep Learning (CNN)
  ☆10Updated 7 years ago
• chenhcs / DIFFUSE
  Deep learning based prediction of IsoForm FUnctions from Sequences and Expression
  ☆15Updated last month
• GfellerLab / MixMHC2pred
  HLA-II ligand predictor.
  ☆44Updated 2 years ago
• Sanofi-Public / RiboNN
  RiboNN: predicting translation efficiencies from mRNA sequences
  ☆32Updated last month
• MaayanLab / maayanlab-bioinformatics
  A collection of useful functions for bioinformatics data analysis
  ☆24Updated last month
• jiujiezz / deephlapan
  A deep learning approach for predicting high-confidence neoantigens by considering both the presentation possibilities of mutant peptides…
  ☆44Updated 2 years ago
• pachterlab / gget_examples
  Examples for gget (https://github.com/pachterlab/gget).
  ☆38Updated 3 months ago
• crazyhottommy / Machine_learning_drug_discovery
  ☆27Updated 4 months ago
• etirouthier / keras_dna
  ☆24Updated 4 years ago
• Genentech / polygraph
  Polygraph evaluates and compares groups of nucleic acid sequences based on their sequence and functional content for effective design of …
  ☆35Updated 5 months ago
• JinsenLi / deepDNAshape
  A method to predict DNA shape features considering farther flanking region.
  ☆35Updated 11 months ago
• zuozhaorui / SWnet
  Core code for the paper "A deep learning model for drug response prediction from cancer genomic signatures and compound chemical structur…
  ☆20Updated 3 years ago
• epigen / KPNN
  Knowledge-primed neural networks
  ☆38Updated 2 years ago
• mhorlacher / rbpnet
  ☆18Updated last year
• hexavier / CUSTOM
  Codon optimizer for tissue-specific expression
  ☆17Updated 11 months ago
• TRON-Bioinformatics / neofox
  Annotation of mutated peptide sequences with published or novel potential neoantigen descriptors
  ☆33Updated 5 months ago
• Illumina / PrimateAI-3D
  ☆65Updated 6 months ago
• ncbi / GNorm2
  ☆25Updated last year
• ctokheim / deepDegron
  Deep learning model to predict degron sequences
  ☆19Updated 2 years ago
• GfellerLab / MixMHCpred
  HLA-I ligand predictor
  ☆42Updated 8 months ago
• zwang-bioinformatics / GOGO
  An Improved Algorithm to Measure the Semantic Similarity of Gene Ontology Terms
  ☆18Updated 5 years ago
• drgoulet / Codon-optimization
  Use machine learning to design codon-optimized DNA sequences for increased protein expression.
  ☆15Updated 2 years ago
• multimeric / Unipressed
  Comprehensive Python client for the Uniprot REST API
  ☆51Updated 2 months ago
• IBM / AutoXAI4Omics
  Automated Explainable AI for Omics
  ☆27Updated 2 weeks ago
• astrazeneca-cgr-publications / milton-release
  MILTON: Disease prediction with biomarkers and augmented PheWAS analyses
  ☆37Updated 11 months ago
• IEDB / PEPMatch
  ☆21Updated last week