imagej / imagej-scriptingLinks
ImageJ-specific applications of the SciJava script languages
☆27Updated 11 months ago
Alternatives and similar repositories for imagej-scripting
Users that are interested in imagej-scripting are comparing it to the libraries listed below
Sorting:
- PSFj - Know your microscope fluorescence☆21Updated 5 years ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆68Updated last month
- ImgLib2/BDV implementation of Stitching for large datasets☆74Updated last week
- ThunderSTORM: a comprehensive ImageJ plugin for SMLM data analysis and super-resolution imaging☆103Updated 7 years ago
- The python-microscopy environment - an open-source package for light microscopy☆90Updated 2 months ago
- CLIJ is deprecated. Visit CLIJ2☆56Updated 4 years ago
- TensorFlow Deconvolution for Microscopy Data☆90Updated 3 years ago
- Various parts made for fluorescence microscopy + optics work☆16Updated 6 years ago
- Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ☆26Updated 3 years ago
- Lattice light-sheet post-processing utility.☆29Updated last month
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Updated last year
- Core functionality of NanoJ☆17Updated last year
- Online documentation and reference for CLIJ☆28Updated 4 years ago
- STORM movie analysis code☆121Updated last year
- Python library for control of microscope devices, supporting hardware triggers and distribution of devices over the network for performan…☆79Updated 2 months ago
- ☆21Updated 4 years ago
- ImageJ plugin detecting and colocalizing particles of given size (vesicles, dots, etc on biological microscopy images)☆20Updated 3 months ago
- CMCI textbook 2, for ImageJ macro course☆18Updated 7 years ago
- Simple Maven project for an ImageJ2 command☆32Updated 3 years ago
- ImageJ convenience layer for N5☆17Updated last month
- ☆23Updated 3 weeks ago
- Microscopy Image Browser version 2 is a package for image processing, segmentation and visualization of multi-dimensional (2D-4D) microsc…☆35Updated 2 weeks ago
- GPU accelerated beam propagation tools for biological light tissue simulations☆37Updated 7 years ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆42Updated 11 months ago
- A hub to start the next generation of Microscope Control Software☆56Updated 4 years ago
- ClearVolume is a real-time live 3D visualization library designed for high-end volumetric microscopes such as SPIM and DLSM microscopes. …☆46Updated 7 months ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 5 months ago
- Lectures for a napari training course☆50Updated 2 years ago
- Connecting Java/ImgLib2 + Python/NumPy☆30Updated 2 months ago
- Reconstruct big images from overlapping tiled images on a Spark cluster.☆34Updated last year