Alternatives and similar repositories for ProcessedAlphafold

Users that are interested in ProcessedAlphafold are comparing it to the libraries listed below

• psipred / DMPfold
  De novo protein structure prediction using iteratively predicted structural constraints
  ☆58Updated 3 years ago
• jertubiana / ProteinMotifRBM
  Learning Protein Constitutive Motifs from Sequence Data: RBM toolbox
  ☆20Updated 6 years ago
• wells-wood-research / alphafold2-multiprocessing
  Use AlphaFold by Deep Mind in Batch Mode + Multiprocessing
  ☆23Updated 3 years ago
• psipred / DMPfold2
  Fast and accurate protein structure prediction
  ☆53Updated 6 months ago
• KULL-Centre / pdbwords
  Printing text using protein structures
  ☆13Updated 3 years ago
• Pranavkhade / PACKMAN
  Python package built around protein structure and dynamics. OpenBabel-inspired objects.
  ☆36Updated last month
• soedinglab / pdbx
  pdbx is a parser module in python for structures of the protein data bank in the mmcif format
  ☆27Updated 11 months ago
• Faezov / PDBrenum
  ☆30Updated 2 months ago
• aqlaboratory / pnerf
  ☆36Updated 5 years ago
• psipred / psipred
  PSIPRED Protein Secondary Structure Predictor
  ☆57Updated 2 weeks ago
• lightdock / lightdock-python2.7
  Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
  ☆24Updated 5 years ago
• jgreener64 / pdb-benchmarks
  Benchmarking common tasks on proteins in various languages and packages
  ☆42Updated 4 years ago
• carlobaldassi / GaussDCA.jl
  Multivariate Gaussian Direct Coupling Analysis for residue contact prediction in protein families - Julia module
  ☆22Updated 3 years ago
• PDBeurope / pdbe-api-training
  Interactive Python notebooks for PDBe API training
  ☆55Updated 3 weeks ago
• tristanic / pae_to_domains
  Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix
  ☆35Updated 2 years ago
• pagnani / PlmDCA.jl
  Pseudo Likelihood Maximization for protein in Julia
  ☆51Updated 2 months ago
• Rappsilber-Laboratory / AlphaLink2
  AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer
  ☆57Updated last month
• labstructbioinf / localpdb
  Python package to manage protein structures and their annotations
  ☆43Updated last year
• sokrypton / seqmodels
  ☆31Updated 4 years ago
• TurtleTools / geometricus
  A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.
  ☆37Updated 2 years ago
• ocramz / jupyter-docker-pymol
  Container-based installation of pymol, with interaction through the browser via Jupyter notebook
  ☆20Updated 6 years ago
• aqlaboratory / hsm
  Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."
  ☆72Updated last year
• rcsb / mmtf-python
  The python implementation of the MMTF API, decoder and encoder.
  ☆46Updated 3 years ago
• ba-lab / pdnet
  PDNET: A fully open-source framework for deep learning protein real-valued distances
  ☆35Updated 4 years ago
• BioComputingUP / AlphaFold-disorder
  Predict disorder and disorder binding from AlphaFold structures
  ☆16Updated 7 months ago
• PDB-REDO / libcifpp
  Library containing code to manipulate mmCIF and PDB files
  ☆35Updated last month
• Pappulab / localCIDER
  localCIDER - sequence analysis tool for disordered protein sequences
  ☆24Updated 2 years ago
• choderalab / ensembler
  Automated omics-scale protein modeling and simulation setup.
  ☆53Updated 3 years ago
• UCL / cathpy
  Python Bioinformatics Toolkit for CATH (Protein Classification Database @ UCL)
  ☆14Updated 9 months ago
• sokrypton / af_backprop
  ☆36Updated 9 months ago