Alternatives and similar repositories for awesome-rna-3D-tools:

Users that are interested in awesome-rna-3D-tools are comparing it to the libraries listed below

• ShintaroMinami / mican
  Non-sequential structural alignment program for protein structure
  ☆19Updated 5 months ago
• KULL-Centre / pdbwords
  Printing text using protein structures
  ☆13Updated 3 years ago
• wwpdb-dictionaries / mmcif_pdbx
  wwPDB PDBx/mmCIF Dictionary
  ☆10Updated last week
• wells-wood-research / alphafold2-multiprocessing
  Use AlphaFold by Deep Mind in Batch Mode + Multiprocessing
  ☆23Updated 3 years ago
• jgreener64 / pdb-benchmarks
  Benchmarking common tasks on proteins in various languages and packages
  ☆41Updated 4 years ago
• psipred / DMPfold2
  Fast and accurate protein structure prediction
  ☆51Updated 2 months ago
• cusbg / traveler
  Template-based RNA secondary structure visualization
  ☆25Updated 4 months ago
• satoken / centroid-rna-package
  Centroid RNA package
  ☆19Updated 4 years ago
• rcsb / RNAView
  RNAView identifies base pairs that are formed in nucleic acid structures and classifies them according to the system of Leontis and Westh…
  ☆16Updated 8 months ago
• greener-group / progres
  Fast protein structure searching or your money back
  ☆95Updated last month
• normandavey / ProcessedAlphafold
  ☆31Updated 3 years ago
• rcsb / rcsb-saguaro-3d
  ☆28Updated this week
• TurtleTools / geometricus
  A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.
  ☆37Updated last year
• MPI-Dortmund / pymissense
  PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.
  ☆23Updated last year
• PDB-REDO / libcifpp
  Library containing code to manipulate mmCIF and PDB files
  ☆33Updated last week
• rohitsinghlab / raygun
  Template-based protein design with Raygun
  ☆57Updated 5 months ago
• PDB-REDO / alphafill
  AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…
  ☆96Updated 2 months ago
• hesther / enzymemap
  Python package to atom map, correct and suggest enzymatic reactions
  ☆36Updated 11 months ago
• labstructbioinf / pLM-BLAST
  Detection of remote homology by comparison of protein language model representations
  ☆49Updated 3 months ago
• BGSU-RNA / fr3d-python
  Python implementation of the FR3D software for searching and annotating RNA 3D structures
  ☆18Updated last week
• proteinphysiologylab / frustratometeR
  ☆35Updated 5 months ago
• JudeWells / chainsaw
  ☆34Updated 6 months ago
• wells-wood-research / PDBench
  PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.
  ☆28Updated 2 years ago
• Pappulab / localCIDER
  localCIDER - sequence analysis tool for disordered protein sequences
  ☆23Updated last year
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆56Updated 3 months ago
• Faezov / PDBrenum
  ☆28Updated 11 months ago
• UCLOrengoGroup / cath-alphaflow
  ☆20Updated 4 months ago
• soedinglab / pdbx
  pdbx is a parser module in python for structures of the protein data bank in the mmcif format
  ☆26Updated 7 months ago
• srnas / barnaba
  Analyse Nucleic Acids Structure and Simulations with baRNAba
  ☆42Updated last year
• tristanic / pae_to_domains
  Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix
  ☆35Updated 2 years ago