mmagnus / awesome-rna-3D-toolsLinks
awesome tools for RNA
☆16Updated 2 years ago
Alternatives and similar repositories for awesome-rna-3D-tools
Users that are interested in awesome-rna-3D-tools are comparing it to the libraries listed below
Sorting:
- ☆31Updated 4 years ago
- Use AlphaFold by Deep Mind in Batch Mode + Multiprocessing☆23Updated 4 years ago
- Fast and accurate protein structure prediction☆55Updated 9 months ago
- Benchmarking common tasks on proteins in various languages and packages☆42Updated 4 years ago
- Printing text using protein structures☆14Updated 4 years ago
- Non-sequential structural alignment program for protein structure☆19Updated 11 months ago
- Pseudo Likelihood Maximization for protein in Julia☆51Updated 5 months ago
- Fast protein structure searching or your money back☆114Updated this week
- Pipeline for protein-protein interaction prediction☆23Updated 3 years ago
- Library containing code to manipulate mmCIF and PDB files☆36Updated this week
- Protein design and variant prediction using autoregressive generative models☆114Updated last year
- RNAView identifies base pairs that are formed in nucleic acid structures and classifies them according to the system of Leontis and Westh…☆17Updated last year
- ☆31Updated 2 weeks ago
- ☆84Updated last month
- AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer☆58Updated last month
- A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.☆41Updated 2 years ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆60Updated 6 months ago
- pdbx is a parser module in python for structures of the protein data bank in the mmcif format☆29Updated last year
- QRNAS: Quick Refinement of Nucleic Acid Structures☆17Updated 5 months ago
- Template-based protein design with Raygun☆74Updated this week
- De novo protein structure prediction using iteratively predicted structural constraints☆60Updated 3 years ago
- Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.☆34Updated 3 years ago
- Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."☆70Updated last year
- PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.☆23Updated 2 years ago
- Physicochemical properties, indices and descriptors for amino-acid sequences.☆105Updated last month
- Code associated with the paper 'Cracking the blackbox of deep sequence-based protein-protein interaction prediction'☆25Updated last year
- MMseqs2 app to run on your workstation or servers☆97Updated last week
- Predict disorder and disorder binding from AlphaFold structures☆17Updated 10 months ago
- A simplified drug discovery pipeline -- generating SMILE molecular with AlphaSMILES, predicting protein structure with AlphaFold, and che…☆17Updated 4 years ago
- Source code and examples for AlphaFold Unmasked☆75Updated 3 weeks ago