PDB-REDO / libcifpp
Library containing code to manipulate mmCIF and PDB files
☆29Updated this week
Related projects ⓘ
Alternatives and complementary repositories for libcifpp
- A simplified implementation of DSSP algorithm for PyTorch and NumPy☆70Updated last week
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆48Updated 3 months ago
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆92Updated this week
- Contact map alignment☆39Updated 3 years ago
- Parametric Building of de novo Functional Topologies☆44Updated 2 years ago
- Direct coupling analysis software for protein and RNA sequences☆47Updated last year
- Fast and accurate protein structure prediction☆49Updated last year
- Pseudo Likelihood Maximization for protein in Julia☆50Updated last year
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆64Updated 2 months ago
- An open-source library for the analysis of protein interactions.☆29Updated 2 years ago
- Protein Structure Analysis☆51Updated 3 months ago
- scripts and facilities for in-silico mutagenesis with FoldX☆51Updated this week
- Tool for modelling the CDRs of antibodies☆45Updated last year
- PyDock Tutorial☆30Updated 6 years ago
- Python package to manage protein structures and their annotations☆40Updated 8 months ago
- AlphaFold-initiated replica exchange protein docking☆45Updated 3 months ago
- ☆30Updated 8 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆78Updated 7 months ago
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆32Updated 2 years ago
- Python interface for the RCSB PDB search API.☆53Updated last month
- A domain parser for Alphafold models☆32Updated 11 months ago
- ☆79Updated 9 months ago
- Set of useful HADDOCK utility scripts☆48Updated 2 months ago
- The DSSP building software☆37Updated last year
- AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer☆48Updated 3 months ago
- Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.☆30Updated 2 years ago
- Improved antibody structure-based design using inverse folding☆75Updated 2 months ago
- Framework for the rapid modeling glycans and glycoproteins.☆28Updated last year
- ☆74Updated last month
- pyPept: a python library to generate atomistic 2D and 3D representations of peptides☆60Updated 2 months ago