Alternatives and similar repositories for dmriprep

Users that are interested in dmriprep are comparing it to the libraries listed below

• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆71Updated 9 months ago
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆42Updated 2 weeks ago
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆77Updated 4 years ago
• nipreps / niworkflows
  Common workflows for MRI (anatomical, functional, diffusion, etc)
  ☆100Updated last week
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆162Updated last week
• nipreps / smriprep
  Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
  ☆149Updated this week
• Deep-MI / fsqc
  A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data
  ☆63Updated last week
• templateflow / templateflow
  The TemplateFlow Archive - A DataLad super-dataset
  ☆87Updated 2 weeks ago
• HALFpipe / HALFpipe
  ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
  ☆101Updated this week
• nipreps / sdcflows
  Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes
  ☆43Updated 2 weeks ago
• raamana / visualqc
  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
  ☆73Updated 2 months ago
• scilus / tractoflow
  TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity
  ☆60Updated 11 months ago
• daducci / COMMIT
  Linear framework to combine tractography and tissue microstructure estimation with diffusion MRI
  ☆47Updated 2 weeks ago
• layerfMRI / LAYNII
  Stand alone fMRI software suite for layer-fMRI analyses.
  ☆101Updated 2 months ago
• CoBrALab / RABIES
  fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/
  ☆44Updated last week
• PennLINC / aslprep
  Preprocessing of arterial spin labeling (ASL) data
  ☆50Updated this week
• Conxz / multiBrain
  A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!
  ☆96Updated 5 months ago
• ExploreASL / ExploreASL
  ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…
  ☆53Updated last month
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆71Updated this week
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆68Updated 3 weeks ago
• maartenmennes / ICA-AROMA
  ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.
  ☆100Updated last year
• HumanBrainED / NHP-BrainExtraction
  ☆39Updated 3 years ago
• MASILab / Synb0-DISCO
  Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
  ☆73Updated 3 weeks ago
• nipreps / nibabies
  fMRIPrep Lifespan - A robust, transparent workflow tailored for neonate and infant MRI
  ☆32Updated last week
• srikash / presurfer
  Scripts to prepare MP2RAGE for Freesurfer
  ☆28Updated last year
• scilus / scilpy
  The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox
  ☆74Updated 3 weeks ago
• ecr05 / MSM_HOCR
  Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries
  ☆41Updated 3 years ago
• bbfrederick / rapidtide
  rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data
  ☆84Updated this week
• bids-apps / HCPPipelines
  A BIDS App for minimal preprocessing using the HCP Pipelines
  ☆36Updated 2 weeks ago
• DCAN-Labs / abcd-hcp-pipeline
  bids application for processing functional MRI data, robust to scanner, acquisition and age variability.
  ☆56Updated last month