Alternatives and similar repositories for ciftify:

Users that are interested in ciftify are comparing it to the libraries listed below

• NeuroanatomyAndConnectivity / gradient_analysis
  ☆90Updated 7 years ago
• faskowit / multiAtlasTT
  multi atlas transfer tools for neuroimaging (maTT)
  ☆64Updated 3 months ago
• MICA-MNI / BrainStat
  A statistics and context decoding toolbox for neuroimaging.
  ☆100Updated 5 months ago
• MidnightScanClub / MSCcodebase
  The Midnight Scanning Club Codebase
  ☆33Updated 5 years ago
• MICA-MNI / micaopen
  Open Scripts and pipelines from the Multimodal Imaging and Connectome Analysis Lab at the Montreal Neurological Institute
  ☆74Updated last month
• arielletambini / denoiser
  Nuisance removal tool for fMRI data
  ☆56Updated last year
• PennLINC / xcpEngine
  Official public repository for the XCP Engine. This tool is deprecated in favor of XCP-D and ASLPrep.
  ☆63Updated last year
• bids-apps / HCPPipelines
  A BIDS App for minimal preprocessing using the HCP Pipelines
  ☆33Updated 4 months ago
• ColeLab / ColeAnticevicNetPartition
  Public release of The Cole-Anticevic Brain-wide Network Partition (CAB-NP)
  ☆68Updated 4 years ago
• andy1764 / ComBatFamily
  ComBat Family of Harmonization Methods
  ☆18Updated 5 months ago
• bids-apps / MRtrix3_connectome
  Generate subject connectomes from raw BIDS data & perform inter-subject connection density normalisation, using the MRtrix3 software pac…
  ☆50Updated last year
• Washington-University / cifti-matlab
  MATLAB code for reading and writing CIFTI connectivity files
  ☆65Updated 4 months ago
• TingsterX / alignment_macaque-human
  cross-species alignment (joint-embedding between human and macaque)
  ☆26Updated 3 years ago
• StuartJO / plotSurfaceROIBoundary
  Plot the boundaries of ROIs on a surface
  ☆65Updated 9 months ago
• yetianmed / subcortex
  ☆109Updated last year
• canlab / Neuroimaging_Pattern_Masks
  Brain signature patterns, atlases of regions, and meta-analysis masks for neuroimaging data analysis.
  ☆114Updated last week
• HALFpipe / HALFpipe
  ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
  ☆85Updated this week
• PennLINC / xcp_d
  Post-processing of fMRIPrep, NiBabies, and HCP outputs
  ☆85Updated this week
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆42Updated 4 months ago
• trendscenter / gift
  Group ICA/IVA software (MATLAB)
  ☆80Updated this week
• templateflow / templateflow
  The TemplateFlow Archive - A DataLad super-dataset
  ☆75Updated 10 months ago
• sidchop / RepoNeuroVis
  Reproducible and Programmatic Human Neuroimaging Visualisations
  ☆80Updated last year
• poldracklab / fitlins
  Fit Linear Models to BIDS Datasets
  ☆75Updated 11 months ago
• noahbenson / neuropythy
  A neuroscience library for Python, intended to complement the existing nibabel library.
  ☆120Updated last month
• raamana / visualqc
  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
  ☆73Updated 8 months ago
• zuoxinian / CCS
  Connectome Computation System
  ☆75Updated 6 months ago
• suyashdb / hcp2bids
  To convert Human Connectome projects(HCP) data to BIDS std
  ☆28Updated 2 years ago
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆76Updated 3 years ago
• juryxy / JuSpace
  This is the repository for the JuSpace toolbox allowing for cross-modal correlations between imaging data and positron emission tomograph…
  ☆43Updated 7 months ago
• poldracklab / ds003-post-fMRIPrep-analysis
  An exemplary task analysis workflow to run on OpenNeuro's ds000003 data, after preprocessing with fMRIPrep
  ☆30Updated 3 years ago