Alternatives and similar repositories for ciftify

Users that are interested in ciftify are comparing it to the libraries listed below

• NeuroanatomyAndConnectivity / gradient_analysis
  ☆105Updated 8 years ago
• ColeLab / ColeAnticevicNetPartition
  Public release of The Cole-Anticevic Brain-wide Network Partition (CAB-NP)
  ☆82Updated 4 years ago
• MICA-MNI / micaopen
  Open Scripts and pipelines from the Multimodal Imaging and Connectome Analysis Lab at the Montreal Neurological Institute
  ☆82Updated 8 months ago
• PennLINC / xcp_d
  Post-processing of fMRIPrep, NiBabies, and HCP outputs
  ☆106Updated this week
• HALFpipe / HALFpipe
  ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
  ☆111Updated this week
• arielletambini / denoiser
  Nuisance removal tool for fMRI data
  ☆57Updated last year
• faskowit / multiAtlasTT
  multi atlas transfer tools for neuroimaging (maTT)
  ☆67Updated last year
• PennLINC / xcpEngine
  Official public repository for the XCP Engine. This tool is deprecated in favor of XCP-D and ASLPrep.
  ☆65Updated 2 years ago
• StuartJO / plotSurfaceROIBoundary
  Plot the boundaries of ROIs on a surface
  ☆71Updated 9 months ago
• yetianmed / subcortex
  ☆142Updated 6 months ago
• MidnightScanClub / MSCcodebase
  The Midnight Scanning Club Codebase
  ☆38Updated 6 years ago
• MICA-MNI / BrainSpace
  BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics data…
  ☆240Updated last month
• miykael / atlasreader
  Python interface for generating coordinate tables and region labels from statistical MRI images
  ☆113Updated last month
• Washington-University / cifti-matlab
  MATLAB code for reading and writing CIFTI connectivity files
  ☆68Updated last year
• maartenmennes / ICA-AROMA
  ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.
  ☆104Updated last year
• juryxy / JuSpace
  This is the repository for the JuSpace toolbox allowing for cross-modal correlations between imaging data and positron emission tomograph…
  ☆63Updated 9 months ago
• MICA-MNI / BrainStat
  A statistics and context decoding toolbox for neuroimaging.
  ☆116Updated last month
• bids-apps / HCPPipelines
  A BIDS App for minimal preprocessing using the HCP Pipelines
  ☆37Updated last month
• templateflow / templateflow
  The TemplateFlow Archive - A DataLad super-dataset
  ☆93Updated last week
• DCAN-Labs / abcd-hcp-pipeline
  bids application for processing functional MRI data, robust to scanner, acquisition and age variability.
  ☆57Updated 3 months ago
• NeuroanatomyAndConnectivity / surfdist
  For calculating exact geodesic distances on cortical surface meshes
  ☆53Updated last year
• neurodata / neuroparc
  ☆209Updated 2 years ago
• andy1764 / ComBatFamily
  ComBat Family of Harmonization Methods
  ☆27Updated 4 months ago
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆44Updated last month
• canlab / Neuroimaging_Pattern_Masks
  Brain signature patterns, atlases of regions, and meta-analysis masks for neuroimaging data analysis.
  ☆128Updated last month
• SIMEXP / load_confounds
  Load fMRIprep confounds in python
  ☆38Updated 3 years ago
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆78Updated 4 years ago
• suyashdb / hcp2bids
  To convert Human Connectome projects(HCP) data to BIDS std
  ☆32Updated 3 years ago
• dutchconnectomelab / Simple-Brain-Plot
  brainPlot is a MATLAB function to create simple line-art brain plots.
  ☆105Updated 4 years ago
• zuoxinian / CCS
  Connectome Computation System
  ☆82Updated last year