Alternatives and similar repositories for pybids

Users that are interested in pybids are comparing it to the libraries listed below

• poldracklab / fitlins
  Fit Linear Models to BIDS Datasets
  ☆77Updated 2 weeks ago
• bids-standard / bids-examples
  A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.
  ☆205Updated this week
• bids-standard / legacy-validator
  Validator for the Brain Imaging Data Structure
  ☆184Updated this week
• Donders-Institute / bidscoin
  BIDScoin converts your source-level neuroimaging data to BIDS
  ☆147Updated last month
• nipy / heudiconv
  Flexible DICOM conversion into structured directory layouts
  ☆270Updated 2 weeks ago
• bids-standard / bids-specification
  Brain Imaging Data Structure (BIDS) Specification
  ☆334Updated this week
• bids-standard / bids-starter-kit
  The Starter-kit has moved to the new BIDS website.
  ☆273Updated 9 months ago
• bbfrederick / rapidtide
  rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data
  ☆87Updated this week
• edickie / ciftify
  The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets
  ☆128Updated 3 years ago
• MICA-MNI / BrainSpace
  BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics data…
  ☆239Updated this week
• templateflow / templateflow
  The TemplateFlow Archive - A DataLad super-dataset
  ☆93Updated 3 weeks ago
• miykael / atlasreader
  Python interface for generating coordinate tables and region labels from statistical MRI images
  ☆113Updated 2 weeks ago
• maartenmennes / ICA-AROMA
  ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.
  ☆104Updated last year
• bids-apps / HCPPipelines
  A BIDS App for minimal preprocessing using the HCP Pipelines
  ☆37Updated 2 months ago
• noahbenson / neuropythy
  A neuroscience library for Python, intended to complement the existing nibabel library.
  ☆127Updated last month
• UNFmontreal / Dcm2Bids
  Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure
  ☆188Updated 3 weeks ago
• nipreps / niworkflows
  Common workflows for MRI (anatomical, functional, diffusion, etc)
  ☆106Updated last week
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆43Updated 2 months ago
• arielletambini / denoiser
  Nuisance removal tool for fMRI data
  ☆57Updated last year
• ReproNim / reproin
  A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners
  ☆49Updated 6 months ago
• PennLINC / xcpEngine
  Official public repository for the XCP Engine. This tool is deprecated in favor of XCP-D and ASLPrep.
  ☆65Updated 2 years ago
• jmtyszka / bidskit
  Utility functions for working with DICOM and BIDS neuroimaging data
  ☆64Updated last month
• raamana / visualqc
  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
  ☆74Updated 5 months ago
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆169Updated this week
• PeerHerholz / BIDSonym
  a BIDS app for pseudo-anonymization of neuroimaging data
  ☆52Updated last month
• HALFpipe / HALFpipe
  ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
  ☆106Updated this week
• miykael / nipype_tutorial
  Learn Nipype with these tutorial notebooks - go here to see them online -->
  ☆127Updated last year
• nilearn / nistats
  Modeling and statistical inference on fMRI data in Python
  ☆98Updated 5 years ago
• physiopy / phys2bids
  Python3 library to format physiological files in BIDS. At the moment, it supports Acqknowledge and Labchart. BrainHack participants, chec…
  ☆66Updated 3 weeks ago
• faskowit / multiAtlasTT
  multi atlas transfer tools for neuroimaging (maTT)
  ☆67Updated last year