A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.
☆229Oct 29, 2026Updated this week
Alternatives and similar repositories for bids-examples
Users that are interested in bids-examples are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The Starter-kit has moved to the new BIDS website.☆277Aug 20, 2026Updated 2 months ago
- Python tools for querying and manipulating BIDS datasets.☆269Oct 23, 2026Updated last week
- Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure☆209Updated this week
- Brain Imaging Data Structure (BIDS) Specification☆370Updated this week
- Validator for the Brain Imaging Data Structure☆185Dec 11, 2025Updated 10 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Flexible DICOM conversion into structured directory layouts☆283Oct 5, 2026Updated 3 weeks ago
- Tools for dealing with neuroimaging data in the BIDS structure☆28Nov 21, 2018Updated 7 years ago
- BIDScoin converts your source-level neuroimaging data to BIDS☆161Oct 22, 2026Updated last week
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆79Feb 14, 2026Updated 8 months ago
- Preprocessing of diffusion MRI☆195Updated this week
- fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual interv…☆760Oct 21, 2026Updated last week
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆121Updated this week
- Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes☆46Updated this week
- Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain☆382Sep 17, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.☆30Updated this week
- Various tools for EEG/MEG data analysis.☆11Aug 27, 2026Updated 2 months ago
- The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets☆136Nov 8, 2022Updated 3 years ago
- MNE-BIDS is a Python package that allows you to read and write BIDS-compatible datasets with the help of MNE-Python.☆183Updated this week
- Workflows and interfaces for neuroimaging packages☆836Updated this week
- Automatically process entire electrophysiological datasets using MNE-Python.☆173Updated this week
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆82Oct 6, 2026Updated 3 weeks ago
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆169Updated this week
- Containers "distribution" for reproducible neuroimaging☆32Updated this week
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Neuroimaging analysis and visualization suite☆884Updated this week
- Fit Linear Models to BIDS Datasets☆82Aug 17, 2026Updated 2 months ago
- Processing pipelines for the HCP☆661Updated this week
- Official AFNI source and documentation☆196Updated this week
- Preprocessing of arterial spin labeling (ASL) data☆65Updated this week
- Pydra Dataflow Engine☆144Updated this week
- DataLad extension for neuroimaging research☆19Sep 5, 2026Updated last month
- micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read…☆121Oct 23, 2026Updated last week
- Machine learning for NeuroImaging in Python☆1,452Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- MATLAB / Octave tools for BIDS datasets☆58Oct 19, 2026Updated last week
- Making neuroimaging open from the grounds (consent form) and up (tools)☆45May 14, 2026Updated 5 months ago
- Generate custom Docker and Singularity images, and minimize existing containers☆361Oct 1, 2026Updated 3 weeks ago
- TE-dependent analysis of multi-echo fMRI☆193Oct 23, 2026Updated last week
- ☆34Sep 30, 2026Updated last month
- BIDS app wrapping recon-all from FreeSurfer☆47Oct 5, 2026Updated 3 weeks ago
- A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners☆56May 12, 2025Updated last year