bids-apps / freesurfer
BIDS app wrapping recon-all from FreeSurfer
☆41Updated 6 months ago
Alternatives and similar repositories for freesurfer:
Users that are interested in freesurfer are comparing it to the libraries listed below
- Tools for mesh surface-based operations☆35Updated 2 months ago
- Load fMRIprep confounds in python☆36Updated 3 years ago
- A BIDS App for minimal preprocessing using the HCP Pipelines☆35Updated 6 months ago
- Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes☆36Updated last week
- PREEMACS. pipeline for PREprocessing and Extraction of the MACaque brain Surface☆16Updated 11 months ago
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆63Updated 5 months ago
- The TemplateFlow Archive - A DataLad super-dataset☆77Updated this week
- Processing tools for high-resolution neuroimaging☆73Updated 5 months ago
- multi atlas transfer tools for neuroimaging (maTT)☆64Updated 5 months ago
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆76Updated 4 years ago
- Nuisance removal tool for fMRI data☆56Updated last year
- Preprocessing of arterial spin labeling (ASL) data☆48Updated last week
- fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/☆41Updated 2 weeks ago
- Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries☆38Updated 2 years ago
- niimath - a clone of fslmaths. Try the live demo:☆60Updated 4 months ago
- Linear framework to combine tractography and tissue micro-structure estimation with diffusion MRI☆46Updated last week
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆67Updated last year
- A statistics and context decoding toolbox for neuroimaging.☆101Updated 7 months ago
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆69Updated this week
- Public repository of cmig_tools including FEMA☆24Updated 5 months ago
- VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.☆73Updated 10 months ago
- Computational Anatomy Toolbox for SPM12 or SPM25☆35Updated last week