rordenlab / niimath
niimath - a clone of fslmaths. Try the live demo:
☆59Updated last month
Alternatives and similar repositories for niimath:
Users that are interested in niimath are comparing it to the libraries listed below
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆62Updated this week
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆46Updated 6 months ago
- Preprocessing of arterial spin labeling (ASL) data☆46Updated this week
- Bash script to compute DTI-ALPS☆42Updated 3 weeks ago
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆66Updated 7 months ago
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆49Updated this week
- MP2RAGE Scripts - T1 map correction & Background noise removal☆54Updated last year
- Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries☆37Updated 2 years ago
- BIDS app wrapping recon-all from FreeSurfer☆42Updated 3 months ago
- Purifibre removes spurious streamlines from tractograms☆10Updated 2 years ago
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆61Updated 3 months ago
- ☆34Updated 2 years ago
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆75Updated 3 years ago
- mrQ_BoxJoinBox☆22Updated last year
- Gradient Unwarping in Python☆34Updated last month
- Matlab code for performing image reconstruction in MRI and performing the NORDIC denoising☆58Updated 3 months ago
- Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline☆51Updated 11 months ago
- Single Shell Free Water Elimination Model for Diffusion Tensor Imaging☆22Updated last year
- Support for CMRR multi-band pulse sequences☆58Updated 2 weeks ago
- Processing tools for high-resolution neuroimaging☆70Updated 2 months ago
- DICOM to NIfTI conversion, NIfTI tools☆94Updated 5 months ago
- A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support☆24Updated 2 weeks ago
- CIVET Installer☆26Updated 3 years ago
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆65Updated last year
- Tools for mesh surface-based operations☆35Updated 5 years ago
- Ironsmith is a comprehensive, fully automated pipeline for creating and processing Quantitative Susceptibility Maps (QSM), extracting QSM…☆22Updated last year
- ☆16Updated last year
- Microscopic diffusion anisotropy imaging made easy!☆23Updated 6 years ago
- Preprocessing of diffusion MRI☆145Updated 2 weeks ago
- fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/e…☆38Updated 2 weeks ago