rordenlab / niimathLinks
niimath - a clone of fslmaths. Try the live demo:
☆70Updated last week
Alternatives and similar repositories for niimath
Users that are interested in niimath are comparing it to the libraries listed below
Sorting:
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆79Updated 3 months ago
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆65Updated last month
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆52Updated last year
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆73Updated 2 weeks ago
- fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/☆46Updated last week
- Processing tools for high-resolution neuroimaging☆72Updated 11 months ago
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆55Updated this week
- BIDS app wrapping recon-all from FreeSurfer☆43Updated last month
- MP2RAGE Scripts - T1 map correction & Background noise removal☆67Updated 2 years ago
- Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data☆116Updated last month
- Preprocessing of diffusion MRI☆167Updated this week
- Preprocessing of arterial spin labeling (ASL) data☆51Updated this week
- Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries☆41Updated 3 years ago
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆77Updated 4 years ago
- Bash script to compute DTI-ALPS☆63Updated last month
- Matlab code for performing image reconstruction in MRI and performing the NORDIC denoising☆66Updated 5 months ago
- Purifibre removes spurious streamlines from tractograms☆10Updated 3 years ago
- Automated Fiber Quantification☆77Updated last year
- VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.☆74Updated 4 months ago
- Stand alone fMRI software suite for layer-fMRI analyses.☆102Updated 2 weeks ago
- The TemplateFlow Archive - A DataLad super-dataset☆92Updated last month
- DICOM to NIfTI conversion, NIfTI tools☆102Updated 2 months ago
- Segmentation of Choroid Plexus using Gaussian Mixture Model☆19Updated 6 months ago
- PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side files like .e.g excel sh…☆31Updated last month
- A workflow to allow Freesurfer recon-all to run on brain image with gliomas☆31Updated last year
- Computational Anatomy Toolbox for SPM12 or SPM25☆37Updated last week
- Toolbox for parameter estimation of the Standard Model of diffusion in white matter☆28Updated 4 months ago
- Atlas-based Imaging Data Analysis Pipeline (AIDA) for structural and functional MRI of the mouse brain☆31Updated last week
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆71Updated 2 weeks ago
- Single Shell Free Water Elimination Model for Diffusion Tensor Imaging☆30Updated last year