rordenlab / niimath
niimath - a clone of fslmaths. Try the live demo:
☆60Updated 2 months ago
Alternatives and similar repositories for niimath:
Users that are interested in niimath are comparing it to the libraries listed below
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆47Updated 7 months ago
- Preprocessing of arterial spin labeling (ASL) data☆48Updated this week
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆63Updated 4 months ago
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆62Updated this week
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆51Updated this week
- Purifibre removes spurious streamlines from tractograms☆10Updated 2 years ago
- Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries☆37Updated 2 years ago
- BIDS app wrapping recon-all from FreeSurfer☆42Updated 4 months ago
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆67Updated 8 months ago
- Single Shell Free Water Elimination Model for Diffusion Tensor Imaging☆24Updated last year
- Bash script to compute DTI-ALPS☆45Updated 3 weeks ago
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆65Updated this week
- Processing tools for high-resolution neuroimaging☆72Updated 3 months ago
- ☆35Updated 3 years ago
- Segmentation of Choroid Plexus using Gaussian Mixture Model☆13Updated 2 years ago
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆76Updated 4 years ago
- A workflow to allow Freesurfer recon-all to run on brain image with gliomas☆29Updated 9 months ago
- MP2RAGE Scripts - T1 map correction & Background noise removal☆55Updated 2 years ago
- Matlab code for performing image reconstruction in MRI and performing the NORDIC denoising☆59Updated 5 months ago
- PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side files like .e.g excel sh…☆27Updated last month
- Open-source eddy-current and head-motion correction for dMRI.☆15Updated last month
- Scripts to prepare MP2RAGE for Freesurfer☆26Updated last year
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆66Updated last year
- Toolbox for parameter estimation of the Standard Model of diffusion in white matter☆22Updated 8 months ago
- Weakly supervised perivascular spaces segmentation with salient guidance of Frangi filter☆12Updated last year
- DICOM to NIfTI conversion, NIfTI tools☆95Updated 7 months ago
- CIVET Installer☆26Updated 3 years ago
- Support for CMRR multi-band pulse sequences☆58Updated last week
- Ironsmith is a comprehensive, fully automated pipeline for creating and processing Quantitative Susceptibility Maps (QSM), extracting QSM…☆22Updated last year