☆15Updated this week
Alternatives and similar repositories for pyAFQ
Users that are interested in pyAFQ are comparing it to the libraries listed below
Sorting:
- Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline Version 2☆31Updated this week
- Please visit our new location: https://github.com/tractometry/pyAFQ☆60Oct 10, 2024Updated last year
- NIST-MNI image processing pipelines☆12Aug 18, 2025Updated 6 months ago
- Automated subdivision of white matter hyperintensities☆12Jan 3, 2022Updated 4 years ago
- Repository for NeuroSnippets Code.☆12Apr 19, 2022Updated 3 years ago
- Single Shell Free Water Elimination Model for Diffusion Tensor Imaging☆32Jan 18, 2024Updated 2 years ago
- WM tract atlases for the human (HCP and UK Biobank) and Macaque brain and connectivity blueprint atlases for the human (HCP) and macaque …☆18Dec 23, 2021Updated 4 years ago
- Amyloid imaging to prevent Alzheimer's Disease☆15Oct 3, 2025Updated 4 months ago
- BOLD-CSF coupling☆21Feb 23, 2024Updated 2 years ago
- Displays regional stats on Freesurfer surfaces in MATLAB☆16Sep 18, 2020Updated 5 years ago
- Parse Siemens PMU files☆14Jul 7, 2024Updated last year
- FRIEND engine is a new implementation of the FRIEND software, a fMRI neurofeedback processing package, already available on the NITRC re…☆15Aug 19, 2019Updated 6 years ago
- nii_preprocess adapted for LARC and ABC studies at UofSC☆23Feb 16, 2022Updated 4 years ago
- Dynamic Causal Modeling with Python☆44Sep 19, 2019Updated 6 years ago
- PipeDream - open source neuroimaging pipelines☆17Aug 29, 2019Updated 6 years ago
- DeepWMH: Annotation-free white matter hyperintensity (WMH) lesion segmentation tool using deep learning.☆21Jun 13, 2025Updated 8 months ago
- DTIPrep performs a "Study-specific Protocol" based automatic pipeline for DWI/DTI quality control and preparation☆19Mar 9, 2021Updated 4 years ago
- An implementation of several well-known dynamic Functional Connectivity assessment methods.☆30Jan 1, 2026Updated 2 months ago
- This repository contains all code for the BLMM toolbox.☆20Jan 31, 2024Updated 2 years ago
- mrQ_BoxJoinBox☆23Sep 27, 2023Updated 2 years ago
- GNU R package for reading and writing neuroimaging file formats. Not limited to FreeSurfer anymore, despite its name.☆23Feb 18, 2026Updated last week
- parallel FSL processing without requiring SGE☆28Sep 3, 2021Updated 4 years ago
- Script-framework using FSL, Freesurfer and AFNI functionality for automatization and high-throughput processing of MRI data in clustered …☆36Mar 12, 2017Updated 8 years ago
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆74Jan 26, 2026Updated last month
- Automated Fiber Quantification☆77Mar 6, 2024Updated last year
- A Tractography Tool for Diffusion MRI☆152Updated this week
- Scripts to prepare MP2RAGE for Freesurfer☆34Oct 27, 2023Updated 2 years ago
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆78Mar 17, 2021Updated 4 years ago
- An integrated framework for DWI Image QC and processing☆13Updated this week
- ☆11Apr 4, 2023Updated 2 years ago
- Neuroimaging in R Talk☆10Apr 9, 2016Updated 9 years ago
- White matter tractography clustering and more...☆80Jun 13, 2025Updated 8 months ago
- Computational Anatomy Toolbox for SPM12 or SPM25☆45Feb 22, 2026Updated last week
- Cognitive Computational Neuroscience online Reading Club(CCN0RC)☆12Jul 30, 2021Updated 4 years ago
- Python script to obtain dynamic functional connectivity metrics, after using a sliding window approach, statistical analyses to test for …☆12Sep 10, 2024Updated last year
- This repository contains the code used for the paper "Towards automated brain aneurysm detection in TOF-MRA: open data, weak labels, and …☆38Feb 14, 2023Updated 3 years ago
- A collection of tools for pre-processing, simulating, and post-processing vascular fluid-structure-interaction problems☆14Dec 15, 2025Updated 2 months ago
- MATLAB code for Multidimensional Diffusion MRI☆10Jun 28, 2021Updated 4 years ago
- Some WholeBrain simulation tests, for now...☆14Aug 25, 2025Updated 6 months ago