Alternatives and similar repositories for heudiconv

Users that are interested in heudiconv are comparing it to the libraries listed below

• UNFmontreal / Dcm2Bids
  Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure
  ☆181Updated 3 weeks ago
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆158Updated 2 months ago
• nipreps / niworkflows
  Common workflows for MRI (anatomical, functional, diffusion, etc)
  ☆99Updated last week
• nipreps / smriprep
  Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
  ☆143Updated last month
• nipreps / mriqc
  Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain
  ☆331Updated last month
• Donders-Institute / bidscoin
  BIDScoin converts your source-level neuroimaging data to BIDS
  ☆143Updated 3 weeks ago
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆67Updated last year
• templateflow / templateflow
  The TemplateFlow Archive - A DataLad super-dataset
  ☆84Updated last month
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆42Updated 8 months ago
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆71Updated 7 months ago
• miykael / nipype_tutorial
  Learn Nipype with these tutorial notebooks - go here to see them online -->
  ☆123Updated last year
• bids-standard / bids-specification
  Brain Imaging Data Structure (BIDS) Specification
  ☆315Updated this week
• poldracklab / pydeface
  defacing utility for MRI images
  ☆122Updated last year
• bids-standard / bids-examples
  A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.
  ☆195Updated 2 weeks ago
• layerfMRI / LAYNII
  Stand alone fMRI software suite for layer-fMRI analyses.
  ☆96Updated 2 weeks ago
• Deep-MI / fsqc
  A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data
  ☆63Updated last week
• edickie / ciftify
  The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets
  ☆123Updated 2 years ago
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆78Updated 4 years ago
• raamana / visualqc
  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
  ☆73Updated 3 weeks ago
• jmtyszka / bidskit
  Utility functions for working with DICOM and BIDS neuroimaging data
  ☆62Updated last month
• afni / afni
  Official AFNI source and documentation
  ☆175Updated last week
• bids-standard / pybids
  Python tools for querying and manipulating BIDS datasets.
  ☆243Updated last week
• ecr05 / MSM_HOCR
  Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries
  ☆41Updated 2 years ago
• maartenmennes / ICA-AROMA
  ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.
  ☆97Updated last year
• faskowit / multiAtlasTT
  multi atlas transfer tools for neuroimaging (maTT)
  ☆64Updated 7 months ago
• neurodata / neuroparc
  ☆186Updated 2 years ago
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆66Updated this week
• PennLINC / aslprep
  Preprocessing of arterial spin labeling (ASL) data
  ☆50Updated 2 weeks ago
• Washington-University / gradunwarp
  Gradient Unwarping in Python
  ☆37Updated 6 months ago
• MICA-MNI / BrainSpace
  BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics data…
  ☆224Updated 5 months ago