Alternatives and similar repositories for fsqc

Users that are interested in fsqc are comparing it to the libraries listed below

• MASILab / Synb0-DISCO
  Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
  ☆73Updated last month
• MASILab / SynBOLD-DisCo
  Synthetic BOLD images for distortion correction of fMRI without additional calibration scans
  ☆27Updated last month
• PennLINC / aslprep
  Preprocessing of arterial spin labeling (ASL) data
  ☆51Updated last week
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆77Updated 4 years ago
• KUL-Radneuron / KUL_VBG
  A workflow to allow Freesurfer recon-all to run on brain image with gliomas
  ☆31Updated last year
• gbarisano / alps
  Bash script to compute DTI-ALPS
  ☆61Updated 2 months ago
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆43Updated last week
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆163Updated 3 weeks ago
• ecr05 / MSM_HOCR
  Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries
  ☆41Updated 3 years ago
• ExploreASL / ExploreASL
  ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…
  ☆54Updated 2 months ago
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆68Updated last month
• templateflow / templateflow
  The TemplateFlow Archive - A DataLad super-dataset
  ☆88Updated last month
• MASILab / PreQual
  An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images
  ☆52Updated last year
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆70Updated last year
• pboutinaud / SHiVAi
  The SHiVAi pipeline for preprocessing, AI-based segmentation, and reporting of cCVSD biomarkers from brain MRI images
  ☆19Updated 3 months ago
• sameerd / DiffusionTensorImaging
  Single Shell Free Water Elimination Model for Diffusion Tensor Imaging
  ☆30Updated last year
• ChristianGaser / cat12
  Computational Anatomy Toolbox for SPM12 or SPM25
  ☆36Updated this week
• isebenius / MIND
  This repository contains a Python implementation of Morphometric INverse Divergence (MIND) calculation for the estimation of structural s…
  ☆40Updated last year
• srikash / presurfer
  Scripts to prepare MP2RAGE for Freesurfer
  ☆29Updated last year
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆71Updated 9 months ago
• MICA-MNI / BrainStat
  A statistics and context decoding toolbox for neuroimaging.
  ☆109Updated 11 months ago
• faskowit / multiAtlasTT
  multi atlas transfer tools for neuroimaging (maTT)
  ☆65Updated 9 months ago
• PennLINC / xcp_d
  Post-processing of fMRIPrep, NiBabies, and HCP outputs
  ☆101Updated this week
• baranaydogan / purifibre
  Purifibre removes spurious streamlines from tractograms
  ☆10Updated 3 years ago
• HumanBrainED / NHP-BrainExtraction
  ☆39Updated 3 years ago
• nipreps / niworkflows
  Common workflows for MRI (anatomical, functional, diffusion, etc)
  ☆101Updated last week
• rpomponio / neuroHarmonize
  Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variabl…
  ☆110Updated this week
• yeatmanlab / AFQ
  Automated Fiber Quantification
  ☆77Updated last year
• Haoyulance / WPSS
  Weakly supervised perivascular spaces segmentation with salient guidance of Frangi filter
  ☆16Updated 2 years ago
• scilus / tractoflow
  TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity
  ☆61Updated 11 months ago