Deep-MI / fsqcLinks
A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data
☆73Updated last month
Alternatives and similar repositories for fsqc
Users that are interested in fsqc are comparing it to the libraries listed below
Sorting:
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆82Updated 5 months ago
- Preprocessing of arterial spin labeling (ASL) data☆53Updated last month
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆78Updated 4 years ago
- A workflow to allow Freesurfer recon-all to run on brain image with gliomas☆32Updated last year
- Preprocessing of diffusion MRI☆171Updated last month
- Bash script to compute DTI-ALPS☆71Updated 4 months ago
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆53Updated last year
- The SHiVAi pipeline for preprocessing, AI-based segmentation, and reporting of cCVSD biomarkers from brain MRI images☆20Updated last week
- niimath - a clone of fslmaths. Try the live demo:☆71Updated 2 months ago
- BIDS app wrapping recon-all from FreeSurfer☆44Updated last month
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆57Updated this week
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆73Updated 2 months ago
- Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries☆42Updated 3 years ago
- ☆10Updated 9 months ago
- Computational Anatomy Toolbox for SPM12 or SPM25☆44Updated last week
- Single Shell Free Water Elimination Model for Diffusion Tensor Imaging☆30Updated last year
- Synthetic BOLD images for distortion correction of fMRI without additional calibration scans☆30Updated 5 months ago
- The TemplateFlow Archive - A DataLad super-dataset☆93Updated last week
- Scripts to prepare MP2RAGE for Freesurfer☆30Updated 2 years ago
- ☆39Updated 3 years ago
- This repository contains a Python implementation of Morphometric INverse Divergence (MIND) calculation for the estimation of structural s…☆47Updated last year
- Processing tools for high-resolution neuroimaging☆73Updated 3 weeks ago
- CHeBA NiL Software with UBO Detector to extract white matter hyperintensities☆10Updated 5 years ago
- Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variabl…☆115Updated this week
- multi atlas transfer tools for neuroimaging (maTT)☆67Updated last year
- Post-processing of fMRIPrep, NiBabies, and HCP outputs☆106Updated this week
- Purifibre removes spurious streamlines from tractograms☆10Updated 3 years ago
- REACT: Receptor-Enriched Analysis of functional Connectivity by Targets☆25Updated 2 years ago
- Segmentations of Neuroanatomy on Hi-Res T1 and T2 MRIs and publicly available population averages in MNI space☆34Updated 3 years ago
- fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/☆48Updated this week