Alternatives and similar repositories for fsqc

Users that are interested in fsqc are comparing it to the libraries listed below

• MASILab / Synb0-DISCO
  Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
  ☆82Updated 4 months ago
• PennLINC / aslprep
  Preprocessing of arterial spin labeling (ASL) data
  ☆53Updated last week
• ecr05 / MSM_HOCR
  Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries
  ☆42Updated 3 years ago
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆78Updated 4 years ago
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆171Updated 2 weeks ago
• ExploreASL / ExploreASL
  ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…
  ☆56Updated this week
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆43Updated last week
• templateflow / templateflow
  The TemplateFlow Archive - A DataLad super-dataset
  ☆93Updated last month
• gbarisano / alps
  Bash script to compute DTI-ALPS
  ☆71Updated 3 months ago
• KUL-Radneuron / KUL_VBG
  A workflow to allow Freesurfer recon-all to run on brain image with gliomas
  ☆32Updated last year
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆71Updated 2 months ago
• MASILab / PreQual
  An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images
  ☆52Updated last year
• ChristianGaser / cat12
  Computational Anatomy Toolbox for SPM12 or SPM25
  ☆44Updated last week
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆73Updated 2 months ago
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆73Updated last week
• ahzhu / eharmonize
  ☆10Updated 8 months ago
• isebenius / MIND
  This repository contains a Python implementation of Morphometric INverse Divergence (MIND) calculation for the estimation of structural s…
  ☆46Updated last year
• baranaydogan / purifibre
  Purifibre removes spurious streamlines from tractograms
  ☆10Updated 3 years ago
• pboutinaud / SHiVAi
  The SHiVAi pipeline for preprocessing, AI-based segmentation, and reporting of cCVSD biomarkers from brain MRI images
  ☆20Updated last month
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆77Updated 2 weeks ago
• kwagstyl / surface_tools
  Tools for mesh surface-based operations
  ☆38Updated 9 months ago
• Haoyulance / WPSS
  Weakly supervised perivascular spaces segmentation with salient guidance of Frangi filter
  ☆16Updated 2 years ago
• MASILab / SynBOLD-DisCo
  Synthetic BOLD images for distortion correction of fMRI without additional calibration scans
  ☆29Updated 4 months ago
• yeatmanlab / AFQ
  Automated Fiber Quantification
  ☆77Updated last year
• sameerd / DiffusionTensorImaging
  Single Shell Free Water Elimination Model for Diffusion Tensor Imaging
  ☆30Updated last year
• nipreps / niworkflows
  Common workflows for MRI (anatomical, functional, diffusion, etc)
  ☆107Updated this week
• cheba-nil / CNS
  CHeBA NiL Software with UBO Detector to extract white matter hyperintensities
  ☆10Updated 5 years ago
• CoBrALab / atlases
  Segmentations of Neuroanatomy on Hi-Res T1 and T2 MRIs and publicly available population averages in MNI space
  ☆34Updated 3 years ago
• PennLINC / xcp_d
  Post-processing of fMRIPrep, NiBabies, and HCP outputs
  ☆106Updated this week
• jcbeer / longCombat
  R package to implement longitudinal ComBat: A method for harmonizing multi-batch longitudinal data
  ☆37Updated 3 months ago