Alternatives and similar repositories for micapipe

Users that are interested in micapipe are comparing it to the libraries listed below

• PennLINC / xcp_d
  Post-processing of fMRIPrep, NiBabies, and HCP outputs
  ☆106Updated last week
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆171Updated 2 weeks ago
• templateflow / templateflow
  The TemplateFlow Archive - A DataLad super-dataset
  ☆93Updated last month
• MICA-MNI / BrainStat
  A statistics and context decoding toolbox for neuroimaging.
  ☆114Updated last month
• HALFpipe / HALFpipe
  ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
  ☆109Updated last week
• MICA-MNI / BrainSpace
  BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics data…
  ☆239Updated 3 weeks ago
• NotaCS / Functionnectome
  Project your functional brain signal onto the white matter, and explore the pathways supporting brain functions.
  ☆34Updated last year
• isebenius / MIND
  This repository contains a Python implementation of Morphometric INverse Divergence (MIND) calculation for the estimation of structural s…
  ☆46Updated last year
• Deep-MI / fsqc
  A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data
  ☆71Updated 2 weeks ago
• PennLINC / aslprep
  Preprocessing of arterial spin labeling (ASL) data
  ☆53Updated 2 weeks ago
• faskowit / multiAtlasTT
  multi atlas transfer tools for neuroimaging (maTT)
  ☆67Updated last year
• DCAN-Labs / abcd-hcp-pipeline
  bids application for processing functional MRI data, robust to scanner, acquisition and age variability.
  ☆57Updated 3 months ago
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆73Updated 2 months ago
• neurodata / neuroparc
  ☆208Updated 2 years ago
• MICA-MNI / ENIGMA
  The ENIGMA Toolbox is an open-source repository for accessing 100+ ENIGMA statistical maps, visualizing cortical and subcortical surface …
  ☆170Updated last week
• sina-mansour / UKB-connectomics
  This repository will host scripts used to map structural and functional brain connectivity matrices for the UK biobank dataset.
  ☆70Updated 3 weeks ago
• MICA-MNI / micaopen
  Open Scripts and pipelines from the Multimodal Imaging and Connectome Analysis Lab at the Montreal Neurological Institute
  ☆82Updated 7 months ago
• predictive-clinical-neuroscience / braincharts
  ☆39Updated 6 months ago
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆43Updated 2 weeks ago
• netneurolab / hansen_many_networks
  Data and code supporting Hansen et al., 2023 PLOS Biology "Integrating multimodal and multiscale connectivity blueprints of the human cer…
  ☆32Updated 5 months ago
• StuartJO / plotSurfaceROIBoundary
  Plot the boundaries of ROIs on a surface
  ☆70Updated 8 months ago
• sidchop / RepoNeuroVis
  Reproducible and Programmatic Human Neuroimaging Visualisations
  ☆83Updated 2 years ago
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆73Updated last week
• braph-software / BRAPH-2
  BRAPH 2.0 is a comprehensive software package for the analysis and visualization of brain connectivity data, offering flexible customizat…
  ☆59Updated 8 months ago
• rmarkello / abagen
  A toolbox for working with Allen Human Brain Atlas microarray expression data
  ☆111Updated last year
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆78Updated 4 years ago
• netneurolab / netneurotools
  Useful tools from the Network Neuroscience Lab
  ☆103Updated 2 months ago
• SIMEXP / load_confounds
  Load fMRIprep confounds in python
  ☆38Updated 3 years ago
• yetianmed / subcortex
  ☆139Updated 5 months ago
• wiheto / netplotbrain
  A package to create simple 3D network visualizations on a brain.
  ☆81Updated 4 months ago