scilus / tractoflowLinks
TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity
☆58Updated 9 months ago
Alternatives and similar repositories for tractoflow
Users that are interested in tractoflow are comparing it to the libraries listed below
Sorting:
- Processing tools for high-resolution neuroimaging☆71Updated 7 months ago
- BIDS app wrapping recon-all from FreeSurfer☆42Updated 8 months ago
- VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.☆73Updated 3 weeks ago
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆67Updated last year
- Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes☆42Updated 3 weeks ago
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆78Updated 4 years ago
- Stand alone fMRI software suite for layer-fMRI analyses.☆96Updated 2 weeks ago
- PALM: Permutation Analysis of Linear Models☆75Updated last month
- ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data☆98Updated last week
- niimath - a clone of fslmaths. Try the live demo:☆66Updated last week
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆99Updated last week
- Tools for mesh surface-based operations☆36Updated 4 months ago
- The TemplateFlow Archive - A DataLad super-dataset☆84Updated last month
- A BIDS App for minimal preprocessing using the HCP Pipelines☆36Updated 8 months ago
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆63Updated last week
- Preprocessing of diffusion MRI☆158Updated 2 months ago
- Utility functions for working with DICOM and BIDS neuroimaging data☆62Updated last month
- rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data☆81Updated this week
- ☆39Updated 3 years ago
- Linear framework to combine tractography and tissue micro-structure estimation with diffusion MRI☆46Updated last month
- Harmonizing neuroimaging data across scanners and sites☆34Updated 4 years ago
- A Python implementation of 'dual-coding'☆42Updated last year
- ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.☆97Updated last year
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆70Updated this week
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆73Updated 11 months ago
- The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets☆123Updated 2 years ago
- NiiStat is a set of Matlab scripts for analyzing neuroimaging data from clinical populations☆32Updated 4 years ago
- Public repository of cmig_tools including FEMA☆24Updated 8 months ago
- Scripts to prepare MP2RAGE for Freesurfer☆28Updated last year
- Scripts and documentation for the PCP's protocol for assessing data quality.