scilus / tractoflowLinks
TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity
☆60Updated last year
Alternatives and similar repositories for tractoflow
Users that are interested in tractoflow are comparing it to the libraries listed below
Sorting:
- Processing tools for high-resolution neuroimaging☆73Updated last year
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆78Updated 4 years ago
- BIDS app wrapping recon-all from FreeSurfer☆43Updated 2 months ago
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆73Updated last month
- Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes☆43Updated this week
- VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.☆74Updated 5 months ago
- Tools for mesh surface-based operations☆38Updated 9 months ago
- Preprocessing of diffusion MRI☆169Updated this week
- Linear framework to combine tractography and tissue microstructure estimation with diffusion MRI☆47Updated 2 months ago
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆55Updated last month
- PALM: Permutation Analysis of Linear Models☆80Updated 2 weeks ago
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆53Updated last year
- Stand alone fMRI software suite for layer-fMRI analyses.☆104Updated 3 weeks ago
- The TemplateFlow Archive - A DataLad super-dataset☆93Updated 3 weeks ago
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆106Updated last week
- niimath - a clone of fslmaths. Try the live demo:☆71Updated last month
- ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.☆104Updated last year
- ComBat Family of Harmonization Methods☆26Updated 3 months ago
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆67Updated 2 weeks ago
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆75Updated 2 weeks ago
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆79Updated 4 months ago
- ☆39Updated 3 years ago
- REACT: Receptor-Enriched Analysis of functional Connectivity by Targets☆25Updated 2 years ago
- PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side files like .e.g excel sh…☆31Updated 2 weeks ago
- fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/☆47Updated this week
- Utility functions for working with DICOM and BIDS neuroimaging data☆64Updated last month
- A BIDS App for minimal preprocessing using the HCP Pipelines☆37Updated 2 months ago
- Connectome Computation System☆82Updated last year
- For calculating exact geodesic distances on cortical surface meshes☆53Updated last year
- Preprocessing of arterial spin labeling (ASL) data☆52Updated 2 weeks ago