Deep-MI / FastSurfer
PyTorch implementation of FastSurferCNN
☆509Updated 3 weeks ago
Alternatives and similar repositories for FastSurfer:
Users that are interested in FastSurfer are comparing it to the libraries listed below
- Contrast-agnostic segmentation of MRI scans☆440Updated 9 months ago
- A fast medical imaging analysis library in Python with algorithms for registration, segmentation, and more.☆708Updated last week
- Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain☆319Updated this week
- Automatic White Matter Bundle Segmentation☆239Updated last year
- Pre-trained models and utilities for deep learning on medical images in Python☆217Updated this week
- MRI brain extraction tool☆331Updated 4 months ago
- Processing pipelines for the HCP☆571Updated last week
- Neuroimaging analysis and visualization suite☆672Updated this week
- Software platform for clinical neuroimaging studies☆250Updated last month
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆139Updated this week
- A framework for joint super-resolution and image synthesis, without requiring real training data☆163Updated last year
- ☆360Updated last week
- Python package to access a cacophony of neuro-imaging file formats☆700Updated last week
- Harmonization of multi-site imaging data with ComBat☆290Updated last year
- A framework for developing neural network models for 3D image processing.☆163Updated last month
- MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), …☆310Updated last week
- Flexible DICOM conversion into structured directory layouts☆253Updated last month
- Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure☆175Updated last week
- dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC☆961Updated last month
- fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual interv…☆670Updated last week
- normalize the intensities of various MR image modalities☆325Updated 3 months ago
- Deep Learning tools for brain medical images☆140Updated 9 months ago
- ITK-SNAP medical image segmentation tool☆360Updated 2 weeks ago
- Framework for the reproducible processing of neuroimaging data with deep learning methods☆167Updated 2 weeks ago
- v1.2 GLSL volume rendering. Able to view NIfTI, DICOM, MGH, MHD, NRRD, AFNI format images.☆222Updated 5 months ago
- Workflows and interfaces for neuroimaging packages☆781Updated last week
- Quantitative MRI Made Easy with qMRLab: MRI software for data Simulation, analysis and visualization☆167Updated last month
- Comprehensive and open-source library of analysis tools for MRI of the spinal cord.☆219Updated this week
- Example download scripts for the OASIS3 project☆146Updated 3 months ago
- Preprocessing of diffusion MRI☆153Updated last week