Alternatives and similar repositories for MRtrix3_connectome

Users that are interested in MRtrix3_connectome are comparing it to the libraries listed below

• faskowit / multiAtlasTT
  multi atlas transfer tools for neuroimaging (maTT)
  ☆64Updated 7 months ago
• bids-apps / HCPPipelines
  A BIDS App for minimal preprocessing using the HCP Pipelines
  ☆35Updated 7 months ago
• Washington-University / cifti-matlab
  MATLAB code for reading and writing CIFTI connectivity files
  ☆66Updated 8 months ago
• MidnightScanClub / MSCcodebase
  The Midnight Scanning Club Codebase
  ☆34Updated 6 years ago
• juryxy / JuSpace
  This is the repository for the JuSpace toolbox allowing for cross-modal correlations between imaging data and positron emission tomograph…
  ☆52Updated 2 months ago
• trendscenter / gift
  Group ICA/IVA software (MATLAB)
  ☆84Updated this week
• HALFpipe / HALFpipe
  ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
  ☆94Updated this week
• yetianmed / subcortex
  ☆121Updated 2 months ago
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆77Updated 4 years ago
• koenhaak / congrads
  Congrads is a data-driven method for mapping the spatial organisation of connectivity within a pre-defined region-of-interest (i.e. conne…
  ☆37Updated 7 years ago
• arielletambini / denoiser
  Nuisance removal tool for fMRI data
  ☆56Updated last year
• ColeLab / ColeAnticevicNetPartition
  Public release of The Cole-Anticevic Brain-wide Network Partition (CAB-NP)
  ☆73Updated 4 years ago
• NeuroanatomyAndConnectivity / gradient_analysis
  ☆94Updated 7 years ago
• templateflow / templateflow
  The TemplateFlow Archive - A DataLad super-dataset
  ☆83Updated last month
• gllmflndn / gifti
  MATLAB/Octave GIfTI Library
  ☆27Updated 3 months ago
• PennLINC / xcpEngine
  Official public repository for the XCP Engine. This tool is deprecated in favor of XCP-D and ASLPrep.
  ☆65Updated 2 years ago
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆42Updated 7 months ago
• DiedrichsenLab / fs_LR_32
  Standard human cortical surface-based template for neuroimaging analyses (Freesurfer, left-right-symmetric, ~32k vertices) v
  ☆43Updated last year
• andy1764 / ComBatFamily
  ComBat Family of Harmonization Methods
  ☆19Updated 9 months ago
• edickie / ciftify
  The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets
  ☆122Updated 2 years ago
• sina-mansour / UKB-connectomics
  This repository will host scripts used to map structural and functional brain connectivity matrices for the UK biobank dataset.
  ☆65Updated last year
• sidchop / RepoNeuroVis
  Reproducible and Programmatic Human Neuroimaging Visualisations
  ☆81Updated 2 years ago
• alexteghipco / brainSurfer
  MATLAB toolbox for visualizing brain data on surfaces.
  ☆35Updated 6 months ago
• SIMEXP / load_confounds
  Load fMRIprep confounds in python
  ☆37Updated 3 years ago
• thalamicseg / hipsthomasdocker
  Docker version of HIPS-THOMAS
  ☆26Updated last month
• PennLINC / aslprep
  Preprocessing of arterial spin labeling (ASL) data
  ☆49Updated this week
• MICA-MNI / micaopen
  Open Scripts and pipelines from the Multimodal Imaging and Connectome Analysis Lab at the Montreal Neurological Institute
  ☆78Updated last month
• StuartJO / plotSurfaceROIBoundary
  Plot the boundaries of ROIs on a surface
  ☆66Updated 2 months ago
• PennLINC / xcp_d
  Post-processing of fMRIPrep, NiBabies, and HCP outputs
  ☆97Updated this week
• ecr05 / MSM_HOCR
  Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries
  ☆39Updated 2 years ago