ReproNim / reproinLinks
A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners
☆49Updated 3 weeks ago
Alternatives and similar repositories for reproin
Users that are interested in reproin are comparing it to the libraries listed below
Sorting:
- Nuisance removal tool for fMRI data☆56Updated last year
- Nipype implementation of BetaSeries Correlations (Beta)☆34Updated 2 years ago
- A BIDS App for minimal preprocessing using the HCP Pipelines☆35Updated 7 months ago
- Official public repository for the XCP Engine. This tool is deprecated in favor of XCP-D and ASLPrep.☆65Updated 2 years ago
- Probabilistic Threshold-Free Cluster Enhancement of Neuroimages☆40Updated last year
- multi atlas transfer tools for neuroimaging (maTT)☆64Updated 6 months ago
- Load fMRIprep confounds in python☆37Updated 3 years ago
- Tools for mesh surface-based operations☆35Updated 3 months ago
- A repo for tools to aggregate public MRIQC data (Neurohackademy 2019)☆26Updated 4 years ago
- Fragments FreeSurfer parcellation annotation in N-equal sized parcels☆28Updated 4 years ago
- Tool to convert raw MRI datasets to BIDS-compatible datasets☆33Updated 3 years ago
- Diffuse Cluster Estimation and Regression. A de-noising tool.☆19Updated 2 years ago
- An exemplary task analysis workflow to run on OpenNeuro's ds000003 data, after preprocessing with fMRIPrep☆31Updated 4 years ago
- Because we all need pointers when it comes to make our code better.☆17Updated 7 months ago
- A package for publication-ready brain surface figures☆62Updated 9 months ago
- Congrads is a data-driven method for mapping the spatial organisation of connectivity within a pre-defined region-of-interest (i.e. conne…☆37Updated 6 years ago
- Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.☆25Updated last month
- To convert Human Connectome projects(HCP) data to BIDS std☆29Updated 2 years ago
- For selectively downloading ABCD data QC'ed as good by the DAIC, converting it to BIDS standard input data, selecting the best pair of sp…☆19Updated 3 months ago
- BIDS app wrapping recon-all from FreeSurfer☆42Updated 7 months ago
- a BIDS app for pseudo-anonymization of neuroimaging data☆51Updated 11 months ago
- Utility functions for working with DICOM and BIDS neuroimaging data☆62Updated 2 weeks ago
- Python interface for generating coordinate tables and region labels from statistical MRI images☆95Updated last week
- Python implementation of Wu et al (2018)'s registration fusion☆27Updated 4 years ago
- MOVED TO https://github.com/nipreps/dmriprep☆17Updated 2 years ago
- The Midnight Scanning Club Codebase☆34Updated 5 years ago
- Python-based Reliability in MRI: Calculating Group level and Individual Level Similarity between runs and sessions.☆36Updated 11 months ago
- Support for CMRR multi-band pulse sequences☆58Updated 2 months ago
- Tool for automatic denoising, denoising strategies comparison, and functional connectivity data quality control.☆47Updated 2 years ago
- Combined cortical/subcortical atlases for xcp-d and qsiprep☆15Updated 9 months ago