ReproNim / reproin
A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners
☆49Updated 3 weeks ago
Alternatives and similar repositories for reproin:
Users that are interested in reproin are comparing it to the libraries listed below
- Nuisance removal tool for fMRI data☆56Updated last year
- Nipype implementation of BetaSeries Correlations (Beta)☆34Updated last year
- A repo for tools to aggregate public MRIQC data (Neurohackademy 2019)☆26Updated 4 years ago
- Tools for mesh surface-based operations☆35Updated 2 weeks ago
- Tool to convert raw MRI datasets to BIDS-compatible datasets☆33Updated 2 years ago
- Official public repository for the XCP Engine. This tool is deprecated in favor of XCP-D and ASLPrep.☆64Updated last year
- A BIDS App for minimal preprocessing using the HCP Pipelines☆33Updated 4 months ago
- Python implementation of Wu et al (2018)'s registration fusion☆27Updated 4 years ago
- Load fMRIprep confounds in python☆36Updated 3 years ago
- Probabilistic Threshold-Free Cluster Enhancement of Neuroimages☆38Updated last year
- Rough draft of a guide for reviewing fmriprep's QA outputs☆26Updated 3 years ago
- Because we all need pointers when it comes to make our code better.☆17Updated 5 months ago
- MATLAB / Octave tools for BIDS datasets☆53Updated this week
- a BIDS app for pseudo-anonymization of neuroimaging data☆51Updated 9 months ago
- BIDS app wrapping recon-all from FreeSurfer☆42Updated 4 months ago
- Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes☆33Updated last week
- Support for CMRR multi-band pulse sequences☆58Updated last week
- Fit Linear Models to BIDS Datasets☆75Updated 11 months ago
- To convert Human Connectome projects(HCP) data to BIDS std☆28Updated 2 years ago
- Fragments FreeSurfer parcellation annotation in N-equal sized parcels☆27Updated 4 years ago
- For selectively downloading ABCD data QC'ed as good by the DAIC, converting it to BIDS standard input data, selecting the best pair of sp…☆19Updated last month
- lipsia3.0☆21Updated last week
- ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.☆93Updated 10 months ago
- Diffuse Cluster Estimation and Regression. A de-noising tool.☆19Updated 2 years ago
- Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.☆25Updated this week
- A package for publication-ready brain surface figures☆56Updated 7 months ago
- MATLAB/Octave GIfTI Library☆25Updated last week
- Utility functions for working with DICOM and BIDS neuroimaging data☆62Updated last month
- Python interface for generating coordinate tables and region labels from statistical MRI images☆92Updated 2 weeks ago
- MATLAB toolbox for visualizing brain data on surfaces.☆32Updated 3 months ago