Alternatives and similar repositories for mriqc

Users that are interested in mriqc are comparing it to the libraries listed below

• nipy / heudiconv
  Flexible DICOM conversion into structured directory layouts
  ☆259Updated last month
• UNFmontreal / Dcm2Bids
  Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure
  ☆179Updated last week
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆155Updated last month
• nipreps / smriprep
  Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
  ☆141Updated 2 weeks ago
• afni / afni
  Official AFNI source and documentation
  ☆173Updated this week
• Donders-Institute / bidscoin
  BIDScoin converts your source-level neuroimaging data to BIDS
  ☆140Updated this week
• bids-standard / bids-examples
  A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.
  ☆192Updated this week
• Washington-University / HCPpipelines
  Processing pipelines for the HCP
  ☆580Updated this week
• nipreps / fmriprep
  fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual interv…
  ☆676Updated last week
• MIC-DKFZ / TractSeg
  Automatic White Matter Bundle Segmentation
  ☆243Updated last year
• MRtrix3 / mrtrix3
  MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), …
  ☆318Updated this week
• bids-standard / bids-specification
  Brain Imaging Data Structure (BIDS) Specification
  ☆313Updated this week
• nipreps / niworkflows
  Common workflows for MRI (anatomical, functional, diffusion, etc)
  ☆97Updated last week
• bids-standard / bids-starter-kit
  The Starter-kit has moved to the new BIDS website.
  ☆266Updated 4 months ago
• poldracklab / pydeface
  defacing utility for MRI images
  ☆122Updated last year
• bids-standard / pybids
  Python tools for querying and manipulating BIDS datasets.
  ☆243Updated last week
• bids-standard / legacy-validator
  Validator for the Brain Imaging Data Structure
  ☆185Updated last week
• MICA-MNI / BrainSpace
  BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics data…
  ☆222Updated 4 months ago
• layerfMRI / LAYNII
  Stand alone fMRI software suite for layer-fMRI analyses.
  ☆95Updated this week
• cMadan / openMorph
  Curated list of open-access databases with human structural MRI data
  ☆128Updated 6 years ago
• neurospin / pypreprocess
  Preprocessing scripts for neuro imaging
  ☆109Updated last year
• andrewjahn / AndysBrainBook
  This repository contains the files that generate Andy's Brain Book on ReadTheDocs.
  ☆195Updated this week
• vistalab / vistasoft
  VISTASOFT is the main software repository of the VISTA lab at Stanford University.
  ☆151Updated 6 months ago
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆71Updated 7 months ago
• daducci / AMICO
  Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data
  ☆109Updated 5 months ago
• miykael / nipype_tutorial
  Learn Nipype with these tutorial notebooks - go here to see them online -->
  ☆122Updated last year
• Jfortin1 / ComBatHarmonization
  Harmonization of multi-site imaging data with ComBat
  ☆294Updated last year
• FCP-INDI / C-PAC
  Configurable Pipeline for the Analysis of Connectomes
  ☆68Updated this week
• xiangruili / dicm2nii
  DICOM to NIfTI conversion, NIfTI tools
  ☆97Updated 10 months ago
• yeatmanlab / AFQ
  Automated Fiber Quantification
  ☆77Updated last year