nipreps / mriqc
Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain
☆316Updated this week
Alternatives and similar repositories for mriqc:
Users that are interested in mriqc are comparing it to the libraries listed below
- Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure☆173Updated 2 weeks ago
- Flexible DICOM conversion into structured directory layouts☆250Updated 3 weeks ago
- Official AFNI source and documentation☆170Updated this week
- Preprocessing of diffusion MRI☆153Updated last week
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆139Updated last month
- MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), …☆308Updated last week
- Automatic White Matter Bundle Segmentation☆238Updated last year
- A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.☆189Updated 3 weeks ago
- Brain Imaging Data Structure (BIDS) Specification☆303Updated last week
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆95Updated 3 weeks ago
- Processing pipelines for the HCP☆568Updated this week
- This repository contains the files that generate Andy's Brain Book on ReadTheDocs.☆190Updated this week
- BIDScoin converts your source-level neuroimaging data to BIDS☆137Updated this week
- Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data☆109Updated 2 months ago
- Configurable Pipeline for the Analysis of Connectomes☆67Updated this week
- DICOM to NIfTI conversion, NIfTI tools☆95Updated 7 months ago
- Gradient Unwarping in Python☆35Updated 3 months ago
- White matter tractography clustering and more...☆73Updated 2 weeks ago
- defacing utility for MRI images☆119Updated last year
- Automated Fiber Quantification☆77Updated last year
- Harmonization of multi-site imaging data with ComBat☆284Updated last year
- Preprocessing scripts for neuro imaging☆107Updated last year
- fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual interv…☆663Updated 3 weeks ago
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆63Updated 5 months ago
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆69Updated 8 months ago
- BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics data…☆208Updated 2 months ago
- ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.☆93Updated 10 months ago
- Stand alone fMRI software suite for layer-fMRI analyses.☆91Updated last week
- Curated list of open-access databases with human structural MRI data☆127Updated 5 years ago
- Learn Nipype with these tutorial notebooks - go here to see them online -->☆123Updated last year