Alternatives and similar repositories for mriqc:

Users that are interested in mriqc are comparing it to the libraries listed below

• UNFmontreal / Dcm2Bids
  Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure
  ☆172Updated 2 months ago
• nipy / heudiconv
  Flexible DICOM conversion into structured directory layouts
  ☆247Updated last week
• nipreps / smriprep
  Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
  ☆139Updated 2 weeks ago
• afni / afni
  Official AFNI source and documentation
  ☆168Updated this week
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆152Updated 3 weeks ago
• bids-standard / bids-examples
  A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.
  ☆189Updated this week
• bids-standard / bids-specification
  Brain Imaging Data Structure (BIDS) Specification
  ☆303Updated this week
• Donders-Institute / bidscoin
  BIDScoin converts your source-level neuroimaging data to BIDS
  ☆136Updated this week
• MRtrix3 / mrtrix3
  MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), …
  ☆306Updated this week
• MICA-MNI / BrainSpace
  BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics data…
  ☆207Updated last month
• nipreps / niworkflows
  Common workflows for MRI (anatomical, functional, diffusion, etc)
  ☆92Updated this week
• MIC-DKFZ / TractSeg
  Automatic White Matter Bundle Segmentation
  ☆233Updated last year
• bids-standard / pybids
  Python tools for querying and manipulating BIDS datasets.
  ☆235Updated last week
• SlicerDMRI / whitematteranalysis
  White matter tractography clustering and more...
  ☆72Updated 2 months ago
• nipreps / fmriprep
  fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual interv…
  ☆659Updated this week
• daducci / AMICO
  Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data
  ☆108Updated 2 months ago
• Washington-University / HCPpipelines
  Processing pipelines for the HCP
  ☆561Updated last week
• cMadan / openMorph
  Curated list of open-access databases with human structural MRI data
  ☆127Updated 5 years ago
• MASILab / Synb0-DISCO
  Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
  ☆67Updated 8 months ago
• Washington-University / workbench
  Connectome Workbench
  ☆196Updated this week
• xiangruili / dicm2nii
  DICOM to NIfTI conversion, NIfTI tools
  ☆95Updated 7 months ago
• andrewjahn / AndysBrainBook
  This repository contains the files that generate Andy's Brain Book on ReadTheDocs.
  ☆189Updated this week
• miykael / nipype_tutorial
  Learn Nipype with these tutorial notebooks - go here to see them online -->
  ☆122Updated last year
• yeatmanlab / AFQ
  Automated Fiber Quantification
  ☆77Updated last year
• poldracklab / pydeface
  defacing utility for MRI images
  ☆118Updated last year
• Washington-University / gradunwarp
  Gradient Unwarping in Python
  ☆35Updated 3 months ago
• Jfortin1 / ComBatHarmonization
  Harmonization of multi-site imaging data with ComBat
  ☆282Updated last year
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆76Updated 4 years ago
• layerfMRI / LAYNII
  Stand alone fMRI software suite for layer-fMRI analyses.
  ☆91Updated 2 weeks ago
• pnlbwh / dMRIharmonization
  Multi-site dMRI harmonization
  ☆47Updated this week