Alternatives and similar repositories for smriprep:

Users that are interested in smriprep are comparing it to the libraries listed below

• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆153Updated this week
• nipreps / niworkflows
  Common workflows for MRI (anatomical, functional, diffusion, etc)
  ☆94Updated 3 weeks ago
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆67Updated last year
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆72Updated 4 months ago
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆76Updated 4 years ago
• layerfMRI / LAYNII
  Stand alone fMRI software suite for layer-fMRI analyses.
  ☆91Updated this week
• templateflow / templateflow
  The TemplateFlow Archive - A DataLad super-dataset
  ☆76Updated 11 months ago
• Deep-MI / fsqc
  A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data
  ☆63Updated 5 months ago
• PennLINC / aslprep
  Preprocessing of arterial spin labeling (ASL) data
  ☆48Updated this week
• Conxz / multiBrain
  A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!
  ☆92Updated last month
• miykael / nipype_tutorial
  Learn Nipype with these tutorial notebooks - go here to see them online -->
  ☆123Updated last year
• MASILab / Synb0-DISCO
  Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
  ☆69Updated 8 months ago
• rpomponio / neuroHarmonize
  Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variabl…
  ☆93Updated this week
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆42Updated 5 months ago
• raamana / visualqc
  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
  ☆73Updated 9 months ago
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆66Updated 2 weeks ago
• Donders-Institute / bidscoin
  BIDScoin converts your source-level neuroimaging data to BIDS
  ☆137Updated this week
• pBFSLab / DeepPrep
  DeepPrep: An accelerated, scalable, and robust pipeline for neuroimaging preprocessing empowered by deep learning
  ☆73Updated 2 months ago
• PennLINC / xcp_d
  Post-processing of fMRIPrep, NiBabies, and HCP outputs
  ☆89Updated this week
• scilus / scilpy
  The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox
  ☆66Updated this week
• nipy / heudiconv
  Flexible DICOM conversion into structured directory layouts
  ☆250Updated 2 weeks ago
• james-cole / brainageR
  Software for generating a brain-predicted age value, using Gaussian Processes regression, implemented in R
  ☆83Updated last year
• UNFmontreal / Dcm2Bids
  Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure
  ☆173Updated 2 weeks ago
• poldracklab / pydeface
  defacing utility for MRI images
  ☆118Updated last year
• neurodata / neuroparc
  ☆176Updated last year
• johncolby / along-tract-stats
  A MATLAB toolbox for performing along-tract analysis of diffusion tensor imaging (DTI) MRI tractography data.
  ☆44Updated 12 years ago
• ExploreASL / ExploreASL
  ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…
  ☆51Updated this week
• sidchop / RepoNeuroVis
  Reproducible and Programmatic Human Neuroimaging Visualisations
  ☆80Updated last year
• carpentries-incubator / SDC-BIDS-sMRI
  Structural Neuroimaging Analysis in Python
  ☆29Updated last week
• MICA-MNI / BrainStat
  A statistics and context decoding toolbox for neuroimaging.
  ☆101Updated 6 months ago