Preprocessing of diffusion MRI
☆186Aug 7, 2026Updated this week
Alternatives and similar repositories for qsiprep
Users that are interested in qsiprep are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆77Feb 14, 2026Updated 5 months ago
- Reconstruction of preprocessed q-space images (dMRI)☆23Updated this week
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆165Updated this week
- Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain☆369Jul 20, 2026Updated 3 weeks ago
- Preprocessing of arterial spin labeling (ASL) data☆63Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity☆63Sep 23, 2024Updated last year
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆116Aug 3, 2026Updated last week
- Flexible DICOM conversion into structured directory layouts☆283Updated this week
- Post-processing of fMRIPrep, NiBabies, and HCP outputs☆117Updated this week
- micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read…☆120Jul 2, 2026Updated last month
- Please visit our new location: https://github.com/tractometry/pyAFQ☆60Oct 10, 2024Updated last year
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆97Jul 20, 2026Updated 3 weeks ago
- A toolbox for comparing brain maps☆338Jun 13, 2026Updated last month
- preprocessing scripts for diffusion imaging☆10Sep 6, 2019Updated 6 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- R library for structural neuroimaging. Provides high-level functions to access (read and write) and visualize surface-based brain morphom…☆77Updated this week
- fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual interv…☆744Aug 3, 2026Updated last week
- MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), …☆351Updated this week
- Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure☆204Updated this week
- The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets☆134Nov 8, 2022Updated 3 years ago
- ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data☆128Updated this week
- A statistics and context decoding toolbox for neuroimaging.☆118May 4, 2026Updated 3 months ago
- Generate custom Docker and Singularity images, and minimize existing containers☆359Jul 1, 2026Updated last month
- Code and documentation supporting Markello & Misic, 2021, "Comparing spatial null models for brain maps" (NeuroImage)☆25Apr 25, 2021Updated 5 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.☆223Jul 23, 2026Updated 2 weeks ago
- ☆11Apr 6, 2026Updated 4 months ago
- Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes☆45Aug 3, 2026Updated last week
- BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics data…☆251Jun 9, 2026Updated 2 months ago
- Automatic White Matter Bundle Segmentation☆265Feb 23, 2026Updated 5 months ago
- Workflows and interfaces for neuroimaging packages☆834Jul 20, 2026Updated 3 weeks ago
- a standalone fork of nipy/nibabel#656☆35Apr 1, 2026Updated 4 months ago
- Python tools for querying and manipulating BIDS datasets.☆262Updated this week
- A Tractography Tool for Diffusion MRI☆160Updated this week
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.☆31Jul 27, 2026Updated 2 weeks ago
- Generate subject connectomes from raw BIDS data & perform inter-subject connection density normalisation, using the MRtrix3 software pac…☆55Apr 26, 2026Updated 3 months ago
- Configurable Pipeline for the Analysis of Connectomes☆83Oct 31, 2025Updated 9 months ago
- Processing pipelines for the HCP☆650Updated this week
- Neuroimaging analysis and visualization suite☆866Updated this week
- Official public repository for the XCP Engine. This tool is deprecated in favor of XCP-D and ASLPrep.☆65Apr 19, 2023Updated 3 years ago
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆92Jul 31, 2025Updated last year