PennLINC / qsiprepLinks
Preprocessing of diffusion MRI
☆163Updated last month
Alternatives and similar repositories for qsiprep
Users that are interested in qsiprep are comparing it to the libraries listed below
Sorting:
- Preprocessing of arterial spin labeling (ASL) data☆51Updated this week
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆102Updated this week
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆70Updated last year
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆151Updated this week
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆65Updated 2 weeks ago
- The TemplateFlow Archive - A DataLad super-dataset☆89Updated last month
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆74Updated last month
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆54Updated this week
- BIDS app wrapping recon-all from FreeSurfer☆43Updated last week
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆77Updated 4 years ago
- Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure☆185Updated 3 months ago
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆52Updated last year
- Processing tools for high-resolution neuroimaging☆71Updated 9 months ago
- Please visit our new location: https://github.com/tractometry/pyAFQ☆59Updated 11 months ago
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆75Updated last week
- micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read…☆109Updated 3 weeks ago
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆71Updated 3 weeks ago
- fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/☆45Updated 3 weeks ago
- Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries☆41Updated 3 years ago
- niimath - a clone of fslmaths. Try the live demo:☆68Updated last month
- Scripts to prepare MP2RAGE for Freesurfer☆29Updated last year
- Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variabl…☆110Updated this week
- Stand alone fMRI software suite for layer-fMRI analyses.☆102Updated last week
- Post-processing of fMRIPrep, NiBabies, and HCP outputs☆101Updated last week
- Bash script to compute DTI-ALPS☆61Updated last week
- Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data☆112Updated last month
- Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes☆43Updated last week
- Automated Fiber Quantification☆77Updated last year
- CIVET Installer☆29Updated 3 years ago
- ☆39Updated 3 years ago