PennLINC / qsiprep
Preprocessing of diffusion MRI
☆153Updated last week
Alternatives and similar repositories for qsiprep:
Users that are interested in qsiprep are comparing it to the libraries listed below
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆95Updated last month
- Preprocessing of arterial spin labeling (ASL) data☆48Updated 2 weeks ago
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆139Updated last month
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆53Updated last week
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆63Updated 5 months ago
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆69Updated 9 months ago
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆67Updated last year
- The TemplateFlow Archive - A DataLad super-dataset☆76Updated last year
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆66Updated this week
- Processing tools for high-resolution neuroimaging☆72Updated 4 months ago
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆68Updated this week
- The open source toolbox for reproducible diffusion MRI-based microstructure estimation☆105Updated 4 months ago
- BIDS app wrapping recon-all from FreeSurfer☆42Updated 5 months ago
- Automated Fiber Quantification☆77Updated last year
- Multi-site dMRI harmonization☆47Updated this week
- niimath - a clone of fslmaths. Try the live demo:☆60Updated 3 months ago
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆76Updated 4 years ago
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆50Updated 8 months ago
- DICOM to NIfTI conversion, NIfTI tools☆95Updated 8 months ago
- Bash script to compute DTI-ALPS☆49Updated last month
- Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variabl…☆94Updated this week
- multi atlas transfer tools for neuroimaging (maTT)☆64Updated 5 months ago
- Scripts to prepare MP2RAGE for Freesurfer☆26Updated last year
- A statistics and context decoding toolbox for neuroimaging.☆101Updated 6 months ago
- Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries☆38Updated 2 years ago
- BIDScoin converts your source-level neuroimaging data to BIDS☆137Updated last week
- Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data☆109Updated 3 months ago
- Post-processing of fMRIPrep, NiBabies, and HCP outputs☆90Updated this week
- White matter tractography clustering and more...☆74Updated 3 weeks ago
- Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure☆174Updated 3 weeks ago