nipreps / fmriprep
fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
☆629Updated this week
Related projects: ⓘ
- Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain☆292Updated last week
- Processing pipelines for the HCP☆533Updated this week
- Collection of tutorials, wikis, and templates to get you started with creating BIDS compliant datasets☆260Updated last month
- Workflows and interfaces for neuroimaging packages☆745Updated last month
- Brain Imaging Data Structure (BIDS) Specification☆273Updated last week
- ☆580Updated last month
- Flexible DICOM conversion into structured directory layouts☆234Updated this week
- Neuroimaging analysis and visualization suite☆578Updated this week
- Neuroimaging in Python FMRI analysis package☆382Updated last month
- Brain Imaging Analysis Kit☆329Updated 2 weeks ago
- Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure☆157Updated 2 weeks ago
- Official AFNI source and documentation☆158Updated this week
- Python tools for querying and manipulating BIDS datasets.☆219Updated this week
- Generate custom Docker and Singularity images, and minimize existing containers☆326Updated this week
- This repository contains the files that generate Andy's Brain Book on ReadTheDocs.☆179Updated this week
- A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.☆168Updated 3 weeks ago
- Python package to access a cacophony of neuro-imaging file formats☆647Updated last week
- MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), …☆290Updated this week
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆132Updated 3 weeks ago
- Validator for the Brain Imaging Data Structure☆181Updated this week
- Harmonization of multi-site imaging data with ComBat☆258Updated last year
- BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics data…☆180Updated 7 months ago
- BIDScoin converts your source-level neuroimaging data to BIDS☆130Updated this week
- Connectome Workbench☆183Updated this week
- A toolbox for comparing brain maps☆234Updated this week
- brain connectivity toolbox for python☆288Updated last year
- Cortical neuroimaging visualization in Python☆240Updated 9 months ago
- Coordinate- and image-based meta-analysis in Python☆178Updated last week
- Configurable Pipeline for the Analysis of Connectomes☆62Updated this week
- TAPAS - Translational Algorithms for Psychiatry-Advancing Science☆216Updated last month