nipreps / fmriprepLinks
fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
☆685Updated last week
Alternatives and similar repositories for fmriprep
Users that are interested in fmriprep are comparing it to the libraries listed below
Sorting:
- Processing pipelines for the HCP☆599Updated last week
- Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain☆335Updated last week
- Flexible DICOM conversion into structured directory layouts☆264Updated last week
- Brain Imaging Data Structure (BIDS) Specification☆319Updated this week
- A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.☆197Updated this week
- The Starter-kit has moved to the new BIDS website.☆268Updated 6 months ago
- Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure☆182Updated 2 months ago
- Python tools for querying and manipulating BIDS datasets.☆246Updated this week
- BIDScoin converts your source-level neuroimaging data to BIDS☆144Updated 3 weeks ago
- Official AFNI source and documentation☆175Updated this week
- Preprocessing of diffusion MRI☆162Updated last week
- Brain Imaging Analysis Kit☆357Updated 7 months ago
- This repository contains the files that generate Andy's Brain Book on ReadTheDocs.☆197Updated last month
- ☆667Updated last month
- Validator for the Brain Imaging Data Structure☆185Updated last month
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆149Updated this week
- BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics data…☆231Updated 6 months ago
- Neuroimaging in Python FMRI analysis package☆398Updated 8 months ago
- A toolbox for comparing brain maps☆297Updated 4 months ago
- Workflows and interfaces for neuroimaging packages☆792Updated last week
- MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), …☆323Updated this week
- Learn Nipype with these tutorial notebooks - go here to see them online -->☆126Updated last year
- Generate custom Docker and Singularity images, and minimize existing containers☆349Updated 2 weeks ago
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆100Updated last week
- Connectome Workbench☆208Updated this week
- ☆193Updated 2 years ago
- Preprocessing scripts for neuro imaging☆110Updated last year
- Neuroimaging analysis and visualization suite☆713Updated this week
- The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets☆126Updated 2 years ago
- Configurable Pipeline for the Analysis of Connectomes☆68Updated this week