fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
☆725Apr 7, 2026Updated last week
Alternatives and similar repositories for fmriprep
Users that are interested in fmriprep are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain☆351Jan 28, 2026Updated 2 months ago
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆162Apr 6, 2026Updated last week
- Workflows and interfaces for neuroimaging packages☆825Mar 30, 2026Updated 2 weeks ago
- Flexible DICOM conversion into structured directory layouts☆276Mar 30, 2026Updated 2 weeks ago
- Processing pipelines for the HCP☆639Updated this week
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Python tools for querying and manipulating BIDS datasets.☆258Apr 6, 2026Updated last week
- Brain Imaging Data Structure (BIDS) Specification☆355Updated this week
- Machine learning for NeuroImaging in Python☆1,384Apr 7, 2026Updated last week
- Fit Linear Models to BIDS Datasets☆80Mar 9, 2026Updated last month
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆109Apr 6, 2026Updated last week
- Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure☆195Mar 6, 2026Updated last month
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆73Feb 14, 2026Updated 2 months ago
- The TemplateFlow Archive - A DataLad super-dataset☆94Mar 17, 2026Updated 3 weeks ago
- The Starter-kit has moved to the new BIDS website.☆277Feb 21, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Brain Imaging Analysis Kit☆370Updated this week
- fmriflows is a consortium of many (dependent) fMRI analysis pipelines, including anatomical and functional pre-processing, univariate 1st…☆72Jun 7, 2022Updated 3 years ago
- dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC☆1,137Nov 4, 2025Updated 5 months ago
- Preprocessing of diffusion MRI☆179Updated this week
- ☆729Mar 25, 2026Updated 2 weeks ago
- Validator for the Brain Imaging Data Structure☆185Dec 11, 2025Updated 4 months ago
- Generate custom Docker and Singularity images, and minimize existing containers☆355Mar 24, 2026Updated 3 weeks ago
- Neuroimaging analysis and visualization suite☆817Updated this week
- Pycortex is a python-based toolkit for surface visualization of fMRI data☆654Updated this week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A toolbox for comparing brain maps☆320Apr 23, 2025Updated 11 months ago
- Configurable Pipeline for the Analysis of Connectomes☆79Oct 31, 2025Updated 5 months ago
- A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.☆219Apr 2, 2026Updated last week
- Modeling and statistical inference on fMRI data in Python☆98Apr 2, 2020Updated 6 years ago
- BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics data…☆245Feb 9, 2026Updated 2 months ago
- Neuroimaging in Python FMRI analysis package☆409Dec 24, 2024Updated last year
- rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data☆94Updated this week
- Post-processing of fMRIPrep, NiBabies, and HCP outputs☆110Updated this week
- Tool for automatic denoising, denoising strategies comparison, and functional connectivity data quality control.☆48Apr 17, 2023Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Cortical neuroimaging visualization in Python☆253Dec 15, 2023Updated 2 years ago
- MATLAB code for reading and writing CIFTI connectivity files☆69Feb 25, 2026Updated last month
- ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.☆105May 17, 2024Updated last year
- Load fMRIprep confounds in python☆38Jan 30, 2022Updated 4 years ago
- Nuisance removal tool for fMRI data☆57Mar 9, 2024Updated 2 years ago
- Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes☆44Apr 6, 2026Updated last week
- MATLAB/Octave GIfTI Library☆28Mar 10, 2025Updated last year