fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
☆757Oct 7, 2026Updated this week
Alternatives and similar repositories for fmriprep
Users that are interested in fmriprep are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain☆380Sep 17, 2026Updated 3 weeks ago
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆169Oct 6, 2026Updated last week
- Workflows and interfaces for neuroimaging packages☆835Updated this week
- Flexible DICOM conversion into structured directory layouts☆282Oct 5, 2026Updated last week
- Processing pipelines for the HCP☆660Updated this week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Python tools for querying and manipulating BIDS datasets.☆267Oct 5, 2026Updated last week
- Brain Imaging Data Structure (BIDS) Specification☆370Oct 5, 2026Updated last week
- Machine learning for NeuroImaging in Python☆1,443Updated this week
- Fit Linear Models to BIDS Datasets☆82Aug 17, 2026Updated last month
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆120Updated this week
- The Starter-kit has moved to the new BIDS website.☆277Aug 20, 2026Updated last month
- Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure☆208Oct 6, 2026Updated last week
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆78Feb 14, 2026Updated 7 months ago
- The TemplateFlow Archive - A DataLad super-dataset☆100Updated this week
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Brain Imaging Analysis Kit☆373Updated this week
- dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC☆1,197Sep 27, 2026Updated 2 weeks ago
- Preprocessing of diffusion MRI☆194Updated this week
- fmriflows is a consortium of many (dependent) fMRI analysis pipelines, including anatomical and functional pre-processing, univariate 1st…☆74Jun 7, 2022Updated 4 years ago
- ☆759Oct 1, 2026Updated last week
- Validator for the Brain Imaging Data Structure☆185Dec 11, 2025Updated 10 months ago
- Generate custom Docker and Singularity images, and minimize existing containers☆361Oct 1, 2026Updated last week
- Neuroimaging analysis and visualization suite☆881Updated this week
- Pycortex is a python-based toolkit for surface visualization of fMRI data☆664Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Configurable Pipeline for the Analysis of Connectomes☆82Oct 31, 2025Updated 11 months ago
- A toolbox for comparing brain maps☆348Jun 13, 2026Updated 4 months ago
- Modeling and statistical inference on fMRI data in Python☆99Apr 2, 2020Updated 6 years ago
- A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.☆228Updated this week
- BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics data…☆254Jun 9, 2026Updated 4 months ago
- Post-processing of fMRIPrep, NiBabies, and HCP outputs☆119Sep 10, 2026Updated last month
- Cortical neuroimaging visualization in Python☆255Dec 15, 2023Updated 2 years ago
- Tool for automatic denoising, denoising strategies comparison, and functional connectivity data quality control.☆50Apr 17, 2023Updated 3 years ago
- rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data☆97Sep 28, 2026Updated 2 weeks ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Nuisance removal tool for fMRI data☆58Aug 19, 2026Updated last month
- MATLAB code for reading and writing CIFTI connectivity files☆73Aug 29, 2026Updated last month
- ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.☆108May 17, 2024Updated 2 years ago
- Load fMRIprep confounds in python☆38Jan 30, 2022Updated 4 years ago
- The ENIGMA Toolbox is an open-source repository for accessing 100+ ENIGMA statistical maps, visualizing cortical and subcortical surface …☆190Jan 15, 2026Updated 8 months ago
- MATLAB/Octave GIfTI Library☆29Mar 10, 2025Updated last year
- Neuroimaging in Python FMRI analysis package☆418Dec 24, 2024Updated last year