nipreps / fmriprep
fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
☆671Updated last week
Alternatives and similar repositories for fmriprep
Users that are interested in fmriprep are comparing it to the libraries listed below
Sorting:
- Processing pipelines for the HCP☆573Updated this week
- Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain☆320Updated this week
- Flexible DICOM conversion into structured directory layouts☆253Updated this week
- Workflows and interfaces for neuroimaging packages☆782Updated 2 weeks ago
- The Starter-kit has moved to the new BIDS website.☆265Updated 2 months ago
- Python tools for querying and manipulating BIDS datasets.☆237Updated 2 weeks ago
- Brain Imaging Data Structure (BIDS) Specification☆307Updated last week
- Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure☆175Updated 2 weeks ago
- Official AFNI source and documentation☆170Updated this week
- Neuroimaging in Python FMRI analysis package☆390Updated 4 months ago
- BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics data…☆216Updated 3 months ago
- A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.☆190Updated last month
- Validator for the Brain Imaging Data Structure☆186Updated this week
- This repository contains the files that generate Andy's Brain Book on ReadTheDocs.☆192Updated this week
- A toolbox for comparing brain maps☆277Updated 3 weeks ago
- Brain Imaging Analysis Kit☆354Updated 4 months ago
- ☆638Updated last week
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆139Updated this week
- Core tools required for running Canlab Matlab toolboxes. The heart of this toolbox is object-oriented tools that enable interactive analy…☆154Updated this week
- Preprocessing of diffusion MRI☆154Updated 2 weeks ago
- MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), …☆312Updated this week
- brain connectivity toolbox for python☆312Updated last year
- Connectome Workbench☆200Updated last week
- Generate custom Docker and Singularity images, and minimize existing containers☆341Updated this week
- BIDScoin converts your source-level neuroimaging data to BIDS☆138Updated 3 weeks ago
- A neuroscience library for Python, intended to complement the existing nibabel library.☆124Updated 3 months ago
- Neuroimaging analysis and visualization suite☆675Updated this week
- Configurable Pipeline for the Analysis of Connectomes☆67Updated this week
- Learn Nipype with these tutorial notebooks - go here to see them online -->☆122Updated last year
- The tools of the Human Connectome Project (HCP) adapted for working with non-HCP datasets☆120Updated 2 years ago