fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
☆739Jun 17, 2026Updated 2 weeks ago
Alternatives and similar repositories for fmriprep
Users that are interested in fmriprep are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain☆366Jun 22, 2026Updated last week
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆165Jun 1, 2026Updated last month
- Workflows and interfaces for neuroimaging packages☆828Jun 22, 2026Updated last week
- Flexible DICOM conversion into structured directory layouts☆282Jun 22, 2026Updated last week
- Processing pipelines for the HCP☆648Jun 26, 2026Updated last week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Python tools for querying and manipulating BIDS datasets.☆260Jun 22, 2026Updated last week
- Brain Imaging Data Structure (BIDS) Specification☆359Jun 26, 2026Updated last week
- Machine learning for NeuroImaging in Python☆1,411Updated this week
- Fit Linear Models to BIDS Datasets☆81Mar 9, 2026Updated 3 months ago
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆115Jun 22, 2026Updated last week
- Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure☆203Jun 11, 2026Updated 3 weeks ago
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆76Feb 14, 2026Updated 4 months ago
- The TemplateFlow Archive - A DataLad super-dataset☆99Mar 17, 2026Updated 3 months ago
- The Starter-kit has moved to the new BIDS website.☆276Feb 21, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Brain Imaging Analysis Kit☆373Jun 20, 2026Updated 2 weeks ago
- fmriflows is a consortium of many (dependent) fMRI analysis pipelines, including anatomical and functional pre-processing, univariate 1st…☆72Jun 7, 2022Updated 4 years ago
- dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC☆1,172Updated this week
- Preprocessing of diffusion MRI☆185Jun 19, 2026Updated 2 weeks ago
- ☆748Mar 25, 2026Updated 3 months ago
- Validator for the Brain Imaging Data Structure☆185Dec 11, 2025Updated 6 months ago
- Generate custom Docker and Singularity images, and minimize existing containers☆358Updated this week
- Neuroimaging analysis and visualization suite☆856Updated this week
- Pycortex is a python-based toolkit for surface visualization of fMRI data☆661Jun 25, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A toolbox for comparing brain maps☆328Jun 13, 2026Updated 3 weeks ago
- Configurable Pipeline for the Analysis of Connectomes☆82Oct 31, 2025Updated 8 months ago
- A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.☆219Jun 24, 2026Updated last week
- Modeling and statistical inference on fMRI data in Python☆98Apr 2, 2020Updated 6 years ago
- BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics data…☆251Jun 9, 2026Updated 3 weeks ago
- rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data☆96Updated this week
- Neuroimaging in Python FMRI analysis package☆414Dec 24, 2024Updated last year
- Post-processing of fMRIPrep, NiBabies, and HCP outputs☆116Jun 11, 2026Updated 3 weeks ago
- Tool for automatic denoising, denoising strategies comparison, and functional connectivity data quality control.☆49Apr 17, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Cortical neuroimaging visualization in Python☆254Dec 15, 2023Updated 2 years ago
- MATLAB code for reading and writing CIFTI connectivity files☆72Feb 25, 2026Updated 4 months ago
- ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.☆106May 17, 2024Updated 2 years ago
- Load fMRIprep confounds in python☆38Jan 30, 2022Updated 4 years ago
- Nuisance removal tool for fMRI data☆58Mar 9, 2024Updated 2 years ago
- Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes☆45Updated this week
- MATLAB/Octave GIfTI Library☆28Mar 10, 2025Updated last year