Alternatives and similar repositories for nipype:

Users that are interested in nipype are comparing it to the libraries listed below

• nipy / nipy
  Neuroimaging in Python FMRI analysis package
  ☆384Updated 3 weeks ago
• nipy / nibabel
  Python package to access a cacophony of neuro-imaging file formats
  ☆669Updated this week
• nipreps / fmriprep
  fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual interv…
  ☆646Updated this week
• nipreps / mriqc
  Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain
  ☆306Updated this week
• nipy / heudiconv
  Flexible DICOM conversion into structured directory layouts
  ☆243Updated 2 months ago
• Washington-University / HCPpipelines
  Processing pipelines for the HCP
  ☆550Updated this week
• MRtrix3 / mrtrix3
  MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), …
  ☆297Updated this week
• nilearn / nilearn
  Machine learning for NeuroImaging in Python
  ☆1,227Updated this week
• ANTsX / ANTs
  Advanced Normalization Tools (ANTs)
  ☆1,241Updated this week
• ReproNim / neurodocker
  Generate custom Docker and Singularity images, and minimize existing containers
  ☆332Updated this week
• dipy / dipy
  DIPY is the paragon 3D/4D+ medical imaging library in Python. Contains generic methods for spatial normalization, signal processing, mach…
  ☆730Updated last week
• freesurfer / freesurfer
  Neuroimaging analysis and visualization suite
  ☆628Updated this week
• nipy / PySurfer
  Cortical neuroimaging visualization in Python
  ☆244Updated last year
• brainiak / brainiak
  Brain Imaging Analysis Kit
  ☆344Updated 2 weeks ago
• bids-standard / bids-specification
  Brain Imaging Data Structure (BIDS) Specification
  ☆296Updated last week
• ANTsX / ANTsPy
  A fast medical imaging analysis library in Python with algorithms for registration, segmentation, and more.
  ☆667Updated this week
• rordenlab / dcm2niix
  dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC
  ☆916Updated this week
• MIC-DKFZ / TractSeg
  Automatic White Matter Bundle Segmentation
  ☆233Updated last year
• bids-standard / pybids
  Python tools for querying and manipulating BIDS datasets.
  ☆228Updated 3 weeks ago
• afni / afni
  Official AFNI source and documentation
  ☆166Updated this week
• UNFmontreal / Dcm2Bids
  Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure
  ☆167Updated last week
• FCP-INDI / C-PAC
  Configurable Pipeline for the Analysis of Connectomes
  ☆65Updated this week
• miykael / nipype_tutorial
  Learn Nipype with these tutorial notebooks - go here to see them online -->
  ☆122Updated 9 months ago
• nipreps / smriprep
  Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
  ☆135Updated 3 weeks ago
• aramis-lab / clinica
  Software platform for clinical neuroimaging studies
  ☆233Updated this week
• bids-standard / bids-starter-kit
  The Starter-kit has moved to the new BIDS website.
  ☆265Updated 3 months ago
• neurospin / pypreprocess
  Preprocessing scripts for neuro imaging
  ☆106Updated last year
• bids-standard / legacy-validator
  Validator for the Brain Imaging Data Structure
  ☆186Updated 2 weeks ago
• cMadan / openMorph
  Curated list of open-access databases with human structural MRI data
  ☆126Updated 5 years ago
• neuronets / nobrainer
  A framework for developing neural network models for 3D image processing.
  ☆159Updated 3 months ago