nipy / nipypeLinks
Workflows and interfaces for neuroimaging packages
☆792Updated last week
Alternatives and similar repositories for nipype
Users that are interested in nipype are comparing it to the libraries listed below
Sorting:
- Neuroimaging in Python FMRI analysis package☆399Updated 8 months ago
- Python package to access a cacophony of neuro-imaging file formats☆731Updated 2 weeks ago
- Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain☆336Updated last week
- fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual interv…☆690Updated last week
- Processing pipelines for the HCP☆606Updated this week
- Cortical neuroimaging visualization in Python☆248Updated last year
- MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), …☆325Updated this week
- Neuroimaging analysis and visualization suite☆717Updated this week
- Flexible DICOM conversion into structured directory layouts☆267Updated last week
- DIPY is the paragon 3D/4D+ medical imaging library in Python. Contains generic methods for spatial normalization, signal processing, mach…☆782Updated last week
- Generate custom Docker and Singularity images, and minimize existing containers☆350Updated this week
- Curated list of open-access databases with human structural MRI data☆129Updated 6 years ago
- Configurable Pipeline for the Analysis of Connectomes☆70Updated this week
- Advanced Normalization Tools (ANTs)☆1,362Updated this week
- Official AFNI source and documentation☆175Updated this week
- Preprocessing scripts for neuro imaging☆110Updated last year
- Brain Imaging Data Structure (BIDS) Specification☆320Updated last week
- defacing utility for MRI images☆126Updated last year
- Brain Imaging Analysis Kit☆358Updated 8 months ago
- A fast medical imaging analysis library in Python with algorithms for registration, segmentation, and more.☆766Updated last week
- Machine learning for NeuroImaging in Python☆1,311Updated this week
- DICOM to Nifti conversion with meta data preservation☆77Updated 9 months ago
- A framework for developing neural network models for 3D image processing.☆166Updated last month
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆151Updated this week
- Automated anatomical brain label/shape analysis software (+ website)☆151Updated 4 years ago
- Automatic White Matter Bundle Segmentation☆248Updated last year
- PyTorch implementation of FastSurferCNN☆539Updated this week
- dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC☆1,029Updated 2 weeks ago
- VISTASOFT is the main software repository of the VISTA lab at Stanford University.☆152Updated 9 months ago
- Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure☆185Updated 3 months ago