Workflows and interfaces for neuroimaging packages
☆836Oct 26, 2026Updated last week
Alternatives and similar repositories for nipype
Users that are interested in nipype are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python package to access a cacophony of neuro-imaging file formats☆799Updated this week
- Neuroimaging in Python FMRI analysis package☆419Dec 24, 2024Updated last year
- fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual interv…☆760Updated this week
- Machine learning for NeuroImaging in Python☆1,452Updated this week
- Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain☆382Sep 17, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Cortical neuroimaging visualization in Python☆255Dec 15, 2023Updated 2 years ago
- Generate custom Docker and Singularity images, and minimize existing containers☆361Updated this week
- Python tools for querying and manipulating BIDS datasets.☆269Oct 23, 2026Updated last week
- Neuroimaging analysis and visualization suite☆884Updated this week
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆121Oct 26, 2026Updated last week
- Flexible DICOM conversion into structured directory layouts☆285Oct 5, 2026Updated 3 weeks ago
- Preprocessing of diffusion MRI☆195Updated this week
- Processing pipelines for the HCP☆661Updated this week
- Learn Nipype with these tutorial notebooks - go here to see them online -->☆132Mar 21, 2024Updated 2 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Advanced Normalization Tools (ANTs)☆1,512Updated this week
- DIPY is the paragon 3D/4D+ medical imaging library in Python. Contains generic methods for spatial normalization, signal processing, mach…☆851Updated this week
- Pydra Dataflow Engine☆144Oct 26, 2026Updated last week
- Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)☆169Oct 26, 2026Updated last week
- Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure☆209Oct 26, 2026Updated last week
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆79Feb 14, 2026Updated 8 months ago
- Brain Imaging Data Structure (BIDS) Specification☆370Oct 26, 2026Updated last week
- Automated anatomical brain label/shape analysis software (+ website)☆156Aug 24, 2026Updated 2 months ago
- Configurable Pipeline for the Analysis of Connectomes☆83Oct 31, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A fast medical imaging analysis library in Python with algorithms for registration, segmentation, and more.☆891Oct 27, 2026Updated last week
- dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC☆1,210Updated this week
- Fit Linear Models to BIDS Datasets☆82Aug 17, 2026Updated 2 months ago
- Pycortex is a python-based toolkit for surface visualization of fMRI data☆665Updated this week
- Validator for the Brain Imaging Data Structure☆185Dec 11, 2025Updated 10 months ago
- BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics data…☆254Oct 22, 2026Updated last week
- Scripts and documentation for the PCP's protocol for assessing data quality.☆42Oct 4, 2021Updated 5 years ago
- MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), …☆357Oct 15, 2026Updated 2 weeks ago
- The Starter-kit has moved to the new BIDS website.☆277Aug 20, 2026Updated 2 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Neuroimaging widgets for jupyter notebooks☆85Dec 8, 2022Updated 3 years ago
- Brain Imaging Analysis Kit☆372Updated this week
- rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data☆99Updated this week
- Preprocessing scripts for neuro imaging☆110Sep 28, 2023Updated 3 years ago
- Coordinate- and image-based meta-analysis in Python☆216Oct 11, 2026Updated 3 weeks ago
- A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.☆229Updated this week
- Timeseries analysis for neuroscience data☆264Sep 1, 2026Updated 2 months ago