Alternatives and similar repositories for surf-ice

Users that are interested in surf-ice are comparing it to the libraries listed below

• neurolabusc / MRIcron
  Simple medical imaging visualization tool designed for NIfTI images. Includes dcm2nii for conversion of DICOM, Philips, and other proprie…
  ☆75Updated 4 years ago
• neurolabusc / MRIcroGL10_OLD
  DEPRECATED development has moved to https://github.com/rordenlab/MRIcroGL
  ☆60Updated 4 years ago
• layerfMRI / LAYNII
  Stand alone fMRI software suite for layer-fMRI analyses.
  ☆104Updated 3 weeks ago
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆71Updated last month
• baranaydogan / purifibre
  Purifibre removes spurious streamlines from tractograms
  ☆10Updated 3 years ago
• bbfrederick / rapidtide
  rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data
  ☆87Updated this week
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆73Updated last year
• andersonwinkler / PALM
  PALM: Permutation Analysis of Linear Models
  ☆80Updated 2 weeks ago
• neurabenn / precon_all
  precon_all surface pipline
  ☆29Updated 6 months ago
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆43Updated 2 months ago
• neurolabusc / NiiStat
  NiiStat is a set of Matlab scripts for analyzing neuroimaging data from clinical populations
  ☆32Updated 5 years ago
• raamana / visualqc
  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
  ☆74Updated 5 months ago
• rordenlab / MRIcroGL
  v1.2 GLSL volume rendering. Able to view NIfTI, DICOM, MGH, MHD, NRRD, AFNI format images.
  ☆258Updated 2 weeks ago
• PRIME-RE / RheMAP
  Non-linear warps between common rhesus macaque brain templates
  ☆28Updated this week
• bids-apps / HCPPipelines
  A BIDS App for minimal preprocessing using the HCP Pipelines
  ☆37Updated 2 months ago
• gllmflndn / gifti
  MATLAB/Octave GIfTI Library
  ☆27Updated 9 months ago
• vistalab / vistasoft
  VISTASOFT is the main software repository of the VISTA lab at Stanford University.
  ☆152Updated last year
• NeuroanatomyAndConnectivity / surfdist
  For calculating exact geodesic distances on cortical surface meshes
  ☆53Updated last year
• bids-apps / MRtrix3_connectome
  Generate subject connectomes from raw BIDS data & perform inter-subject connection density normalisation, using the MRtrix3 software pac…
  ☆54Updated last week
• PeerHerholz / BIDSonym
  a BIDS app for pseudo-anonymization of neuroimaging data
  ☆52Updated last month
• templateflow / templateflow
  The TemplateFlow Archive - A DataLad super-dataset
  ☆93Updated 3 weeks ago
• nipreps / sdcflows
  Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes
  ☆43Updated this week
• DCAN-Labs / abcd-dicom2bids
  For selectively downloading ABCD data QC'ed as good by the DAIC, converting it to BIDS standard input data, selecting the best pair of sp…
  ☆19Updated 9 months ago
• trislett / TFCE_mediation
  Fast regression and mediation analysis of vertex or voxel MRI data with TFCE
  ☆31Updated 2 years ago
• CMRR-C2P / MB
  Support for CMRR multi-band pulse sequences
  ☆60Updated 9 months ago
• jmtyszka / bidskit
  Utility functions for working with DICOM and BIDS neuroimaging data
  ☆64Updated last month
• faskowit / multiAtlasTT
  multi atlas transfer tools for neuroimaging (maTT)
  ☆67Updated last year
• afni / afni
  Official AFNI source and documentation
  ☆181Updated this week
• brainsprite / brainsprite
  Brainsprite turns a sprite of brain slices into a 3D interactive web viewer
  ☆45Updated 2 weeks ago
• bioimagesuiteweb / bisweb
  This is the repository for the BioImage Suite Web Project
  ☆84Updated 10 months ago