neurolabusc / surf-ice
GLSL surface rendering source code. Compiled versions available from NITRC. Loads 3DS, CTM, DXF, FreeSurfer, GII (GIfTI), GTS, LWO2, MS3D, MZ3, NV (BrainNetViewer), OBJ, OFF, PLY, STL, VTK. Tractography formats include BFloat, PDB, TCK, TRK, and VTK. Also NIfTI format voxelwise images.
☆107Updated 2 years ago
Alternatives and similar repositories for surf-ice:
Users that are interested in surf-ice are comparing it to the libraries listed below
- Simple medical imaging visualization tool designed for NIfTI images. Includes dcm2nii for conversion of DICOM, Philips, and other proprie…☆68Updated 3 years ago
- DEPRECATED development has moved to https://github.com/rordenlab/MRIcroGL☆59Updated 4 years ago
- fmriflows is a consortium of many (dependent) fMRI analysis pipelines, including anatomical and functional pre-processing, univariate 1st…☆62Updated 2 years ago
- Stand alone fMRI software suite for layer-fMRI analyses.☆91Updated 2 months ago
- For calculating exact geodesic distances on cortical surface meshes☆53Updated 5 months ago
- NiiStat is a set of Matlab scripts for analyzing neuroimaging data from clinical populations☆31Updated 4 years ago
- BIDS app wrapping recon-all from FreeSurfer☆42Updated 2 months ago
- Purifibre removes spurious streamlines from tractograms☆10Updated 2 years ago
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆75Updated 3 years ago
- niimath - a clone of fslmaths. Try the live demo:☆57Updated 3 weeks ago
- Generate subject connectomes from raw BIDS data & perform inter-subject connection density normalisation, using the MRtrix3 software pac…☆49Updated last year
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆91Updated this week
- MATLAB/Octave GIfTI Library☆25Updated last year
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆62Updated this week
- multi atlas transfer tools for neuroimaging (maTT)☆63Updated 2 months ago
- Preprocessing of diffusion MRI☆142Updated this week
- ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.☆92Updated 8 months ago
- A Tractography Tool for Diffusion MRI☆127Updated this week
- Computational Anatomy Toolbox for SPM12 or SPM25☆33Updated this week
- MATLAB toolbox for visualizing brain data on surfaces.☆32Updated 3 weeks ago
- VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.☆73Updated 7 months ago
- ☆169Updated last year
- The TemplateFlow Archive - A DataLad super-dataset☆75Updated 9 months ago
- Python interface for generating coordinate tables and region labels from statistical MRI images☆91Updated this week
- Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries☆37Updated 2 years ago
- A BIDS App for minimal preprocessing using the HCP Pipelines☆34Updated 2 months ago
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆60Updated 2 months ago
- Utility functions for working with DICOM and BIDS neuroimaging data☆62Updated last month
- Version 2 of the minc-toolkit, uses tools based on ITK version 4.x☆50Updated last month
- A MATLAB toolbox for performing along-tract analysis of diffusion tensor imaging (DTI) MRI tractography data.☆43Updated 11 years ago