nicolaprezza / BWTILLinks
BWT Text Indexing Library: a set of tools to work with BWT-based text indexes
☆25Updated 3 years ago
Alternatives and similar repositories for BWTIL
Users that are interested in BWTIL are comparing it to the libraries listed below
Sorting:
- Dynamic succinct/compressed data structures☆111Updated last year
- Online construction of run-length BWT (RLBWT) and r-index. Plus, online LZ77 parsing based on RLBWT.☆15Updated 7 years ago
- Compact Tree Representation☆16Updated 8 years ago
- Wavelet tree based on a fixed block boosting technique☆16Updated 4 years ago
- An optimal space run-length Burrows-Wheeler transform full-text index☆66Updated 2 years ago
- An efficient external-memory algorithm for the construction of minimal perfect hash functions☆64Updated last year
- FM-Index full-text index implementation using RRR Wavelet trees (libcds) and fast suffix sorting (libdivsufsort) including experimental r…☆107Updated 10 years ago
- Succinct Data Structure Library 3.0☆96Updated 3 weeks ago
- Succinct Data Structure Library☆107Updated 11 years ago
- Relative data structures based on the BWT☆12Updated 7 years ago
- COBS - Compact Bit-Sliced Signature Index (for Genomic k-Mer Data or q-Grams)☆83Updated last year
- compressed, queryable variation graphs☆11Updated 10 years ago
- Compact Data Structures Library☆128Updated 11 years ago
- A tool for merging large BWTs☆26Updated 4 years ago
- Compact Data Structures Library☆101Updated 3 years ago
- Space-Efficient, High-Performance Rank & Select Structures on Uncompressed Bit Sequences☆55Updated last year
- Implementation of eBWT using Prefix-free parse (PFP)☆14Updated 2 months ago
- Extremely fast inplace radix sort☆42Updated 5 years ago
- Bloom-filter based minimal perfect hash function library☆265Updated last month
- An alignment-free, reference-free and incremental data structure for colored de Bruijn graph with application to pan-genome indexing.☆44Updated 3 years ago
- Parallel Lightweight Suffix Array Algorithm.☆18Updated 8 years ago
- SetSketch: Filling the Gap between MinHash and HyperLogLog☆48Updated 4 years ago
- Bit packed vector of integral values☆27Updated 7 months ago
- A cheatsheet for most common Stringology tasks☆15Updated 4 years ago
- A General-Purpose Counting Filter: Counting Quotient Filter☆128Updated 2 years ago
- Highly optimized implementation of tiered vectors, a data structure for maintaining a sequence of n elements supporting access in time O(…☆50Updated last year
- Ultra fast MSD radix sorter☆11Updated 5 years ago
- A fast implementation for varbyte 32bit/64bit integer compression☆119Updated 8 years ago
- Implementation of a Backpack Quotient Filter☆12Updated 2 months ago
- TU DOrtmund lossless COMPression framework☆19Updated last year