dominikkempa / fsaisLinks
External memory suffix array construction using inducing
☆11Updated 4 years ago
Alternatives and similar repositories for fsais
Users that are interested in fsais are comparing it to the libraries listed below
Sorting:
- Online construction of run-length BWT (RLBWT) and r-index. Plus, online LZ77 parsing based on RLBWT.☆15Updated 7 years ago
- Wavelet tree based on a fixed block boosting technique☆16Updated 4 years ago
- BWT Text Indexing Library: a set of tools to work with BWT-based text indexes☆25Updated 3 years ago
- Compact Tree Representation☆16Updated 8 years ago
- TU DOrtmund lossless COMPression framework☆19Updated 10 months ago
- COBS - Compact Bit-Sliced Signature Index (for Genomic k-Mer Data or q-Grams)☆84Updated last year
- Run-length compressed BWT with LZ77 sampled suffix array☆10Updated 3 years ago
- Dynamic succinct/compressed data structures☆112Updated last year
- An efficient external-memory algorithm for the construction of minimal perfect hash functions☆64Updated last year
- R-Index-F Library for Pattern Matching☆13Updated 11 months ago
- A tool for merging large BWTs☆26Updated 4 years ago
- C++ Implementation of Zip Trees☆14Updated 2 years ago
- Succinct Data Structure Library 3.0☆94Updated 2 months ago
- Relative data structures based on the BWT☆12Updated 7 years ago
- FOundation of stXXl and thriLL☆14Updated last year
- Header-only, gzread-like reader for gzip, bz2, and xz.☆12Updated 6 years ago
- A (Minimal) Perfect Hash Function based on irregular cuckoo hashing, retrieval, and overloading.☆19Updated 3 months ago
- An optimal space run-length Burrows-Wheeler transform full-text index☆65Updated 2 years ago
- LZ Double factor Factorization.☆11Updated 8 years ago
- 📖 🧬 SSHash is a compressed, associative, exact, and weighted dictionary for k-mers.☆88Updated this week
- In-place Parallel Super Scalar Radix Sort (IPS²Ra)☆32Updated 5 months ago
- linear time suffix array construction algorithm☆12Updated 8 years ago
- FM-Index full-text index implementation using RRR Wavelet trees (libcds) and fast suffix sorting (libdivsufsort) including experimental r…☆107Updated 10 years ago
- Ultra fast MSD radix sorter☆11Updated 5 years ago
- Parallel Wavelet Tree and Wavelet Matrix Construction☆26Updated 2 years ago
- Bit packed vector of integral values☆27Updated 5 months ago
- Implementation of eBWT using Prefix-free parse (PFP)☆14Updated 10 months ago
- Parallel Suffix Array, LCP Array, and Suffix Tree Construction☆49Updated 5 years ago
- SetSketch: Filling the Gap between MinHash and HyperLogLog☆49Updated 3 years ago
- A cheatsheet for most common Stringology tasks☆15Updated 4 years ago