External memory suffix array construction using inducing
☆12Jul 27, 2020Updated 6 years ago
Alternatives and similar repositories for fsais
Users that are interested in fsais are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- BWT Text Indexing Library: a set of tools to work with BWT-based text indexes☆25Apr 25, 2022Updated 4 years ago
- Online construction of run-length BWT (RLBWT) and r-index. Plus, online LZ77 parsing based on RLBWT.☆14May 11, 2018Updated 8 years ago
- Wavelet tree based on a fixed block boosting technique☆17May 18, 2021Updated 5 years ago
- A tool for merging large BWTs☆23Nov 26, 2020Updated 5 years ago
- COBS - Compact Bit-Sliced Signature Index (for Genomic k-Mer Data or q-Grams)☆89Jan 25, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A space-efficient compressor based on the Re-Pair grammar☆13Apr 6, 2017Updated 9 years ago
- A cheatsheet for most common Stringology tasks☆14Apr 14, 2021Updated 5 years ago
- Implementation of eBWT using Prefix-free parse (PFP)☆14Jul 14, 2025Updated last year
- TU DOrtmund lossless COMPression framework☆20Sep 7, 2024Updated 2 years ago
- Paper Collection for Stringologists☆17Updated this week
- An optimal space run-length Burrows-Wheeler transform full-text index☆70May 31, 2023Updated 3 years ago
- Optimal suffix sorting and LCP array construction for constant alphabets [IPL 2017]☆10Aug 17, 2018Updated 8 years ago
- 🌳 A compressed rank/select dictionary exploiting approximate linearity and repetitiveness.☆15Jun 28, 2022Updated 4 years ago
- Collection of Suffix Array Construction Algorithms (SACAs)☆35Mar 29, 2019Updated 7 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Some near drop in stl compatible hash tables that are a lot more space efficient than any other options.☆24Sep 16, 2022Updated 3 years ago
- gsufsort: building suffix arrays, LCP-arrays and BWTs for string collections [AMB 2020]☆27Feb 16, 2025Updated last year
- linear time suffix array construction algorithm☆12Oct 28, 2016Updated 9 years ago
- Code used in the paper "On dynamic succinct graph representations".☆11Sep 2, 2021Updated 5 years ago
- Relative data structures based on the BWT☆12Apr 28, 2018Updated 8 years ago
- Run-length compressed BWT with LZ77 sampled suffix array☆10Apr 25, 2022Updated 4 years ago
- Optimal partitioning of Variable-Byte codes for better compression and fast decoding.☆17Nov 10, 2021Updated 4 years ago
- Practical Dynamic de Bruijn Graphs☆18Oct 1, 2020Updated 5 years ago
- ☆11Feb 21, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Parallel Wavelet Tree and Wavelet Matrix Construction☆26Jun 27, 2023Updated 3 years ago
- Generalized enhanced suffix array construction in external memory [CPM'13, AMB 2017]☆17Aug 9, 2021Updated 5 years ago
- Parallel Suffix Array, LCP Array, and Suffix Tree Construction☆53Aug 12, 2019Updated 7 years ago
- Parallel Genomic Analysis Toolkit☆14Feb 11, 2019Updated 7 years ago
- SUccinct Retrieval Framework☆21Jan 24, 2016Updated 10 years ago
- MEM mapper prototype☆13Nov 28, 2020Updated 5 years ago
- run-length BWT tools for genomic sequences☆19May 19, 2022Updated 4 years ago
- Collection of Parallel String Sorting Algorithms including Parallel Super Scalar String Sample Sort and Parallel Multiway LCP-Mergesort☆33Jun 13, 2023Updated 3 years ago
- R-Index-F Library for Pattern Matching☆12Aug 8, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Parameterless and Universal FInding of Nearest Neighbors☆60Mar 13, 2025Updated last year
- CLI utilty to work out proper constants for vpternlogic instruction☆13Jan 22, 2023Updated 3 years ago
- Example project presented at the Succinct Data Structure Tutorial at SIGIR 2016☆27Oct 27, 2018Updated 7 years ago
- Statistical Natural Language Processing with Annotated Suffix Trees☆22Jul 22, 2016Updated 10 years ago
- ☆10Feb 23, 2024Updated 2 years ago
- Dynamic succinct/compressed data structures☆120Dec 17, 2025Updated 8 months ago
- MAW: a suite on the computation and application of Minimal Absent Words☆18Nov 1, 2021Updated 4 years ago