ngs-docs / 2021-GGG298Links
Winter 2021, GGG 298 - Tools for Data Intensive Research - UC Davis
☆12Updated 4 years ago
Alternatives and similar repositories for 2021-GGG298
Users that are interested in 2021-GGG298 are comparing it to the libraries listed below
Sorting:
- ☆22Updated 2 months ago
- Smooth-quantile Normalization Adaptation for Inference of co-expression Links☆16Updated 2 years ago
- R package specialized in HLA typing clustering and visualization based on specific similarity metrics☆12Updated 5 years ago
- Chromatin ACcessibility and Transcriptomics Unifying Software☆16Updated 8 months ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 3 years ago
- Comprehensive Human Expressed SequenceS☆17Updated this week
- ☆22Updated 5 months ago
- ☆20Updated last month
- Slinker offers a succinct and complementary method to visualise RNA-Seq data through superTranscripts.☆19Updated 3 years ago
- A lightweight reimplementation of some of the algorithms in the MEME suite in Python.☆16Updated 3 weeks ago
- Filter and prioritize fusion calls☆20Updated 9 months ago
- interactive plots for differential expression analysis☆32Updated 3 weeks ago
- Two pass alignment for long reads☆22Updated 4 years ago
- Build single sample pair-based (rule-based) classifiers using top-score pairs or random forest for multi-class problems.☆12Updated 2 years ago
- a Shiny/R application to view and annotate copy number variations☆28Updated 2 years ago
- Snakemake workflow for neoantigen prediction☆14Updated last year
- Interactive eQTL visualizations☆13Updated 2 years ago
- Accompanying analysis code for the FRASER manuscript☆26Updated 4 years ago
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Updated 6 years ago
- ☆12Updated last year
- 🤖 Open‑source deep-learning-based splice‑site predictor that decodes splicing patterns across species☆21Updated last week
- ☆16Updated last month
- Comprehensive and scalable differential splicing analyses☆17Updated 4 months ago
- FREE Divergence Error-Correcting DNA Barcodes☆9Updated 7 years ago
- A Python package for fast operations on 1-dimensional genomic signal tracks☆24Updated 5 years ago
- End-guided RNA assembler☆15Updated 3 months ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- nanoNOMe (Nucleosome Occupancy and Methylome nanopore sequencing) Analysis☆18Updated 2 years ago
- ☆17Updated 11 months ago
- Versatile FASTA/FASTQ demultiplexer.☆33Updated last year