ngs-docs / 2016-metagenomics-sioLinks
Metagenomics workshop at Scripps Institute of Oceanography
☆9Updated 8 years ago
Alternatives and similar repositories for 2016-metagenomics-sio
Users that are interested in 2016-metagenomics-sio are comparing it to the libraries listed below
Sorting:
- Some useful python scripts for biologists☆32Updated 8 months ago
- A pipeline for performing genome-wide association tests for bacterial genomes.☆27Updated 7 years ago
- ☆22Updated 5 years ago
- This repository houses the code to run SURPI+, a rapid computational pipeline for comprehensive identification of pathogens from clinical…☆41Updated 5 years ago
- A repository for the lessons and notebooks used for Binder tutorials☆14Updated 4 years ago
- Scripts for NGS processing☆17Updated 7 years ago
- Codes and sample data supporting the Dutch Microbiome Project. The preprint is currently available at https://www.biorxiv.org/content/10.…☆34Updated 4 years ago
- Workflows for metagenomic sequence data processing and analysis.☆17Updated 6 years ago
- HomBlocks: A multiple-alignment construction pipeline for organelle phylogenomics based on locally collinear block searching☆34Updated 8 years ago
- repo for cicese metatranscriptomics workshop, nov 2018☆14Updated 5 years ago
- Code for running the analysis in our universe of genes project☆8Updated 6 years ago
- ShortBRED is a pipeline to take a set of protein sequences, reduce them to a set of unique identifying strings ("markers"), and then sear…☆31Updated 6 months ago
- scripts for sequence and feature conversion, annotation, analysis ...☆28Updated 4 months ago
- ☆19Updated 3 years ago
- Program for finding horizontal gene transfer using BLAST result☆11Updated 2 years ago
- For computational analysis of bacterial RNA-seq data☆12Updated 8 years ago
- ☆32Updated 2 years ago
- A shiny package for microbiome functional enrichment analysis☆37Updated 3 months ago
- Evolutionary Transcriptomics with R☆45Updated this week
- VirusSeeker is a set of fully automated and modular software package designed for mining sequence data to identify sequences of microbial…☆17Updated 7 years ago
- Metagenomics Workshop☆28Updated 8 years ago
- microRNA PREdiction From small RNA-seq data☆29Updated 7 years ago
- web documentation for Trinotate☆48Updated 2 years ago
- The Prokaryotic Genomics and Comparative Genomics Analysis Pipeline☆39Updated 2 years ago
- A program for degenerate primer design for broad taxonomic-range PCR for microbial ecology studies☆30Updated 2 years ago
- Calculates the lowest common ancestors of each query sequence in a Blast result☆31Updated 7 years ago
- ☆23Updated 7 years ago
- Set of utilities on sequences and BAM files☆27Updated 3 years ago
- GO FEAT: a rapid web-based functional annotation tool for genomic and transcriptomic data☆17Updated last year
- collection of bioinformatic scripts☆31Updated last year