ncbi / workshop-ncbi-data-with-pythonLinks
☆22Updated 3 years ago
Alternatives and similar repositories for workshop-ncbi-data-with-python
Users that are interested in workshop-ncbi-data-with-python are comparing it to the libraries listed below
Sorting:
- ☆108Updated 2 months ago
- ClinVar aggregates information about genomic variation and its relationship to human health. Contact us at 'clinvar@ncbi.nlm.nih.gov…☆82Updated 3 weeks ago
- Standard bioinformatics pipelines for omics data from spaceflight and space-relevant experiments.☆107Updated last week
- Fast HLA type inference from whole-genome data☆141Updated 10 months ago
- A fully reproducible and state-of-the-art ancient DNA analysis pipeline☆197Updated last week
- Plugins for the Ensembl Variant Effect Predictor (VEP)☆165Updated 2 weeks ago
- ☆119Updated 3 years ago
- The Ensembl Core Perl API and SQL schema☆83Updated last week
- ncbi-vdb☆93Updated 2 weeks ago
- IGV Web App☆127Updated 3 weeks ago
- dbSNP☆142Updated last year
- Bioinformatics Workbook repository☆204Updated last month
- ☆54Updated 2 weeks ago
- Long read production pipelines☆151Updated this week
- Sequana: a set of Snakemake NGS pipelines☆151Updated 2 weeks ago
- Call and score variants from WGS/WES of rare disease patients.☆112Updated this week
- website for the rnaseq course☆117Updated 2 months ago
- CCS: Generate Highly Accurate Single-Molecule Consensus Reads (HiFi Reads)☆126Updated last year
- Viral Annotation DefineR: classification and annotation of viral sequences based on RefSeq annotation☆114Updated 3 weeks ago
- Synthego ICE - Inference of CRISPR Editing software☆69Updated last year
- Assembly and intrahost/low-frequency variant calling for viral samples☆154Updated 2 weeks ago
- Discovering known and novel miRNAs from small RNA sequencing data☆158Updated last month
- Pipeline to fetch metadata and raw FastQ files from public databases☆186Updated 2 weeks ago
- Explore gnomAD datasets on the web☆86Updated this week
- DeepMod: a deep-learning tool for genomic-scale, strand-sensitive and single-nucleotide based detection of DNA modifications☆104Updated 2 years ago
- Scrapping tool for GISAID data regarding SARS-CoV-2☆41Updated 2 years ago
- Utilities for building and managing bioconda recipes☆103Updated 3 weeks ago
- NEAT (NExt-generation Analysis Toolkit) simulates next-gen sequencing reads and can learn simulation parameters from real data.☆66Updated this week
- RNA-seq analysis pipeline for detection of gene-fusions☆170Updated 3 weeks ago
- NanoDJ: A Dockerized Jupyter Notebook for Interactive Oxford Nanopore MinION Sequence Manipulation and Genome Assembly☆51Updated 6 years ago