indexofire / ndafp
New version
☆33Updated 8 years ago
Alternatives and similar repositories for ndafp:
Users that are interested in ndafp are comparing it to the libraries listed below
- Scripts for next generation sequencing☆48Updated 5 years ago
- Simple code snippets and data for the One Flowcell - One Assembly study☆36Updated 7 years ago
- This repository houses the code to run SURPI+, a rapid computational pipeline for comprehensive identification of pathogens from clinical…☆40Updated 5 years ago
- A simple plot library☆52Updated 7 years ago
- Helper scripts for biological data processing from Sentieon☆64Updated 2 months ago
- ☆88Updated 4 years ago
- PCR Primer Quality Control☆59Updated 9 months ago
- Snakemake pipelines for nanopore sequencing data archiving and processing☆88Updated 2 years ago
- PacBio Assembly Tool Suite: Reads in ⇨ Assembly out☆114Updated 4 years ago
- A general metagenomics data mining system focus on robust microbiome research☆56Updated 4 months ago
- Course material for the metagenomics course☆43Updated 2 years ago
- Genome Scripts used in fungal comparative genomics☆65Updated 4 years ago
- ☆32Updated 2 years ago
- A practical guide to build de-novo transcriptome assemblies for non-model organisms (described in Montero-Mendieta et al. 2017).☆27Updated 7 years ago
- This script will extract the intron feature gff3 and sequence from gene_exon gff3 and fasta file.☆33Updated 6 years ago
- Tools for working with second gen assemblies, fasta sequences, etc☆92Updated 8 years ago
- ☆51Updated 6 years ago
- Snakemake workflow for metagenomic classification with Kraken2☆65Updated last year
- A package for designing compact and comprehensive capture probe sets.☆79Updated 11 months ago
- Automates running of OrthoMCL software from http://orthomcl.org/common/downloads/software/v2.0/☆80Updated 4 years ago
- Pair-End AssembeR☆29Updated 10 years ago
- ☆70Updated 4 years ago
- Workflow for Building Microsynteny Networks☆48Updated 2 years ago
- convert various features into a GFF-like file for use in genome browsers☆69Updated last year
- SAMSA pipeline, version 2.0. An open-source metatranscriptomics pipeline for analyzing microbiome data, built around DIAMOND and customi…☆57Updated 9 months ago
- Development version of Easyfig☆93Updated last year
- LRSDAY: Long-read Sequencing Data Analysis for Yeasts☆31Updated 10 months ago
- Scripts and data for Duran & Thiergart et al. Cell, 2018☆24Updated 5 years ago