Alternatives and similar repositories for blast_plus_docs

Users that are interested in blast_plus_docs are comparing it to the libraries listed below

• veg / hyphy
  HyPhy: Hypothesis testing using Phylogenies
  ☆249Updated this week
• cbg-ethz / V-pipe
  V-pipe is a pipeline designed for analysing NGS data of short viral genomes
  ☆144Updated 2 months ago
• libnano / primer3-py
  Simple oligo analysis and primer design
  ☆190Updated 2 weeks ago
• The-Sequence-Ontology / Specifications
  GFF and GVF specification documents
  ☆219Updated last year
• primer3-org / primer3
  Primer3 is a command line tool to select primers for polymerase chain reaction (PCR).
  ☆275Updated 8 months ago
• daler / gffutils
  GFF and GTF file manipulation and interconversion
  ☆313Updated this week
• neufeld / pandaseq
  PAired-eND Assembler for DNA sequences
  ☆137Updated 5 years ago
• ISUgenomics / bioinformatics-workbook
  Bioinformatics Workbook repository
  ☆204Updated last month
• barricklab / breseq
  breseq is a computational pipeline for finding mutations relative to a reference sequence using high-throughput DNA resequencing data. It…
  ☆175Updated 2 months ago
• AliView / AliView
  Software for aligning viewing and editing dna/aminoacid sequences, intuitive, fast and lightweight. Download and website:
  ☆147Updated 3 weeks ago
• gpertea / gffread
  GFF/GTF utility providing format conversions, region filtering, FASTA sequence extraction and more
  ☆451Updated last year
• sanger-pathogens / Artemis
  Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the…
  ☆261Updated last month
• HadrienG / InSilicoSeq
  A sequencing simulator
  ☆219Updated 7 months ago
• sortmerna / sortmerna
  SortMeRNA: next-generation sequence filtering and alignment tool
  ☆284Updated 5 months ago
• melbournebioinformatics / melbournebioinformatics.github.io
  Melbourne Bioinformatics documentation in markdown format
  ☆120Updated last week
• kblin / ncbi-acc-download
  Download files from NCBI Entrez by accession
  ☆132Updated last year
• timflutre / trimmomatic
  Read trimming tool for Illumina NGS data.
  ☆149Updated 10 years ago
• jotech / gapseq
  Informed prediction and analysis of bacterial metabolic pathways and genome-scale networks
  ☆203Updated last week
• nf-core / fetchngs
  Pipeline to fetch metadata and raw FastQ files from public databases
  ☆186Updated last week
• g2nb / igv-jupyter
  Extension for Jupyter which integrates igv.js
  ☆154Updated 3 years ago
• nextflow-io / training
  Nextflow training material
  ☆211Updated this week
• snakemake / snakemake-wrappers
  This is the development home of the Snakemake wrapper repository, see
  ☆239Updated last week
• antismash / antismash
  antiSMASH
  ☆240Updated 2 months ago
• igvteam / igv-webapp
  IGV Web App
  ☆127Updated 2 weeks ago
• ucscGenomeBrowser / kent
  UCSC Genome Browser source. "beta" is released version / "master" is testing.
  ☆250Updated last week
• agordon / fastx_toolkit
  FASTA/FASTQ pre-processing programs
  ☆197Updated 3 years ago
• broadinstitute / viral-ngs
  [THIS REPO IS DEPRECATED] see newer repos: https://github.com/broadinstitute/viral-core https://github.com/broadinstitute/viral-assemble …
  ☆193Updated last year
• bioconda / bioconda-utils
  Utilities for building and managing bioconda recipes
  ☆103Updated 3 weeks ago
• moshi4 / pyGenomeViz
  A genome visualization python package for comparative genomics
  ☆387Updated last month
• Gaius-Augustus / Augustus
  Genome annotation with AUGUSTUS
  ☆324Updated 5 months ago