nasa / GeneLab_Data_Processing
☆76Updated this week
Alternatives and similar repositories for GeneLab_Data_Processing:
Users that are interested in GeneLab_Data_Processing are comparing it to the libraries listed below
- A repository for GeneLab Training documentation.☆34Updated 2 months ago
- A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.☆46Updated 2 years ago
- Bioinformatics one-liner for 100 days☆47Updated last year
- Variant Calling Pipeline Using GATK4 and Nextflow☆54Updated 2 years ago
- The Subread software package is a tool kit for processing next-gen sequencing data. It includes Subread aligner, Subjunc exon-exon juncti…☆43Updated last year
- Ribo-seq TIS Hunter, predicting translation initiation sites and ORFs using riboseq data☆38Updated 4 months ago
- HPC based pipelines for variant calling using GATK☆17Updated 5 years ago
- A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.☆68Updated this week
- ☆77Updated 2 weeks ago
- optimization of ribosome P-site positioning in ribosome profiling data☆51Updated 2 months ago
- Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq☆78Updated this week
- Genomics data visualization in Python by using matplotlib.☆64Updated last year
- BAMscale is a one-step tool for either 1) quantifying and normalizing the coverage of peaks or 2) generated scaled BigWig files for easy …☆68Updated 4 months ago
- Graph-based alignment (Hierarchical Graph FM index)☆17Updated 5 years ago
- An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)☆112Updated 2 months ago
- A small-RNA sequencing analysis pipeline☆83Updated last week
- Fit-Hi-C is a tool for assigning statistical confidence estimates to chromosomal contact maps produced by genome-wide genome architecture…☆84Updated 2 years ago
- HemTools: a collection of NGS pipelines and bioinformatic analyses☆70Updated last week
- Mikado is a lightweight Python3 pipeline whose purpose is to facilitate the identification of expressed loci from RNA-Seq data * and to s…☆101Updated 2 months ago
- My youtube programming scripts☆52Updated 3 months ago
- Software for Quantifying Interspersed Repeat Expression☆55Updated 2 years ago
- Lima - Demultiplex Barcoded PacBio Samples☆66Updated last month
- cDNA read preprocessing☆66Updated 8 months ago
- rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis☆54Updated 2 months ago
- Precision HLA typing from next-generation sequencing data☆66Updated last week
- Fuji plot—a circos representation of multiple GWAS results—☆84Updated last year
- Analysis of Chromosome Conformation Capture data (Hi-C)☆99Updated 2 months ago
- PrimerServer2: a high-throughput primer design and specificity-checking platform☆77Updated 2 years ago
- NBIS/Elixir course: Tools for Reproducible Research☆65Updated last month
- Collection of analysis tools for quantitative trait loci☆54Updated 3 weeks ago