Alternatives and similar repositories for ClusDoC

Users that are interested in ClusDoC are comparing it to the libraries listed below

• saalfeldlab / n5-ij
  ImageJ convenience layer for N5
  ☆19Updated this week
• sofroniewn / napari-training-course
  Lectures for a napari training course
  ☆50Updated 2 years ago
• HenriquesLab / PhotoFiTT
  Computational workflows to assess phototoxicity in live-cell microscopy experiments
  ☆11Updated 4 months ago
• BiAPoL / imagej-macro-cheat-sheet
  ☆20Updated 4 years ago
• pswapnesh / misic
  segmentation of rod-shaped bacteria
  ☆15Updated 2 years ago
• UU-cellbiology / ZstackDepthColorCode
  Z-stack Depth Colorcode ImageJ FIJI plugin
  ☆25Updated 3 months ago
• maurosilber / SMO
  Robust and unbiased estimation of the background distribution for fluorescence microscopy.
  ☆13Updated 3 months ago
• aelefebv / Mitometer
  Automated mitochondrial segmentation and tracking.
  ☆33Updated 4 years ago
• JaneliaSciComp / awesome-janelia-software
  A curated list of awesome Janelia software
  ☆17Updated 11 months ago
• BIOP / coLoc
  A Board Game to teach co-localization analysis
  ☆13Updated last year
• kwolbachia / Visualization_toolset
  Imagej toolset to ease hyperstacks visualization and handling
  ☆23Updated last year
• kwolbachia / KTZ-LUTs
  Handmade ImageJ / Fiji LUTs for microscopy, scientific good visualization and art.
  ☆13Updated last year
• AndrewGYork / high_na_single_objective_lightsheet
  Parts list and build instructions for our high-numerical-aperture lightsheet. Read the publication here: https://andrewgyork.github.io/hi…
  ☆22Updated last year
• UU-cellbiology / ComDet
  ImageJ plugin detecting and colocalizing particles of given size (vesicles, dots, etc on biological microscopy images)
  ☆19Updated 7 months ago
• maurosilber / binlets
  Denoising via adaptive binning.
  ☆13Updated last month
• EricThomson / CCN_caiman_mesmerize_workshop_2023
  Repo for CCN workshop on caiman and mesmerize in January 2023
  ☆13Updated 2 years ago
• albert597 / TRAILMAP
  ☆46Updated 5 years ago
• haesleinhuepf / imagejmacromarkdown
  Generate markdown notebooks from ImageJ Macro
  ☆26Updated 4 years ago
• fmi-faim / napari-psf-analysis
  A napari plugin to analysis point spread functions.
  ☆12Updated 10 months ago
• cleterrier / Utils
  ☆10Updated last year
• JaneliaSciComp / bigstream
  Tools for distributed alignment of massive images
  ☆92Updated this week
• FlowRegSuite / flow_registration
  Flow-Registration toolbox for 2P motion compensation
  ☆27Updated 4 months ago
• fmi-basel / LSTree
  LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.
  ☆20Updated 2 years ago
• Open-Science-Tools / nd2reader
  Pure Python library for reading NIS Elements ND2 images and metadata
  ☆48Updated last year
• saalfeldlab / bigwarp
  A tool for manual pointwise deformable registration using bigdataviewer.
  ☆35Updated last month
• RoccoDAnt / napari-zelda
  ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari
  ☆25Updated 2 months ago
• ries-lab / RiesPieces
  Recipes for open microscopy
  ☆12Updated 5 years ago
• BiAPoL / napari-clusters-plotter
  A napari plugin for clustering objects according to their properties.
  ☆90Updated 2 weeks ago
• DanuserLab / u-signal3D
  The computational platform u-signal3D defines a shape-invariant representation of the spatial scales of molecular organization at the cel…
  ☆11Updated 2 weeks ago
• ariel-waisman / LabelsToROIs
  A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification
  ☆23Updated 4 years ago