motu-tool / FetchMGsLinks
☆13Updated 3 weeks ago
Alternatives and similar repositories for FetchMGs
Users that are interested in FetchMGs are comparing it to the libraries listed below
Sorting:
- Providing up-to-date phage genome databases, metrics and useful input files for a number of bioinformatic pipelines.☆75Updated 8 months ago
- GenoVi, an automated customizable circular genome visualizer for bacteria and archaea☆99Updated 2 years ago
- A modular end-to-end suite for in silico recovery, clustering, and analysis of prokaryotic, microeukaryotic, and viral genomes from metag…☆98Updated 2 months ago
- PHANOTATE: a gene caller for phages.☆79Updated last year
- A tool to raise the quality of viral genomes assembled from short-read metagenomes via resolving and joining of contigs fragmented during…☆82Updated 3 months ago
- Classification of Eukaryotic and Prokaryotic sequences from metagenomic datasets☆75Updated last year
- Predict the function of phage hypothetical proteins using an LSTM model trained with Phage Synteny☆57Updated 6 months ago
- Reorients assembled microbial sequences☆131Updated 4 months ago
- A pipeline to computationally identify invertible DNA regions and quantify their orientations.☆31Updated last year
- A tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category☆76Updated 7 months ago
- ARG normalization by mapping to the ARO ontology.☆62Updated 4 months ago
- Tool to estimate genome quality of microbial eukaryotes☆38Updated 4 months ago
- ☆81Updated 3 weeks ago
- Follow up to Grace Blackwell's 661k dataset, for 2023☆127Updated 3 months ago
- ☆63Updated last year
- tiara – a tool for DNA sequence classification☆72Updated last year
- A wrapper to identify, bin, classify, and predict host-viral relationship for viruses☆82Updated 11 months ago
- Program to quickly and accurately assemble plasmids in hybrid and long-only sequenced bacterial isolates☆81Updated last week
- A pipeline for running AMRfinderPlus and collating results into functional classes☆90Updated 2 weeks ago
- Find clustered hits from a BLAST search☆127Updated last month
- MacSyFinder - Detection of macromolecular systems in protein datasets using systems modelling and similarity search.☆70Updated 2 months ago
- All of my various bioinformatic scripts fit for public consumption (loosely defining "fit")☆80Updated 2 years ago
- ☆31Updated 10 months ago
- Convert GTDB taxonomy to NCBI taxdump format☆72Updated 2 years ago
- A toolkit for exploring prokaryotic methylation and base modifications in nanopore sequencing☆51Updated 2 weeks ago
- Binning Virus Genomes from Metagenomes☆68Updated 3 years ago
- Reference-quality genome reconstruction from complex metagenomes (or bacterial isolates) using only Nanopore long reads or both long and …☆33Updated 2 years ago
- Locate antiviral defence systems in prokaryotic genomes☆64Updated last year
- HMM-based identification and categorization of iron genes and iron gene operons in genomes and metagenomes☆64Updated 3 years ago
- post processing of bacterial pangenome gene presence/absence matrices☆63Updated 9 months ago