☆17Jun 7, 2026Updated 4 months ago
Alternatives and similar repositories for FetchMGs
Users that are interested in FetchMGs are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Repository for GreeningLab metabolic marker gene databases☆15May 28, 2026Updated 5 months ago
- Linking MAGs with 16S rRNA marker genes☆27Feb 8, 2025Updated last year
- simple and not slow ORF caller☆24Apr 7, 2026Updated 7 months ago
- MDMcleaner the assessment, classification and refinement tool for microbial dark matter SAGs and MAGs☆25Mar 19, 2023Updated 3 years ago
- ☆65Oct 28, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆31Aug 2, 2026Updated 3 months ago
- Perl and Python scripts allowing to get sequence information from GenBank, RefSeq or ENA sequence repositories☆14Mar 29, 2025Updated last year
- alignment-free coverage calculation for metagenomic binning >100 times faster☆58May 8, 2026Updated 5 months ago
- skDER & CiDDER: efficient & high-resolution dereplication of microbial genomes.☆66Oct 29, 2026Updated last week
- A taxonomic classifier of plasmids☆32Jul 7, 2021Updated 5 years ago
- Normalized Stochasticity Ratio in community assembly☆31Oct 22, 2024Updated 2 years ago
- ☆10Jun 9, 2025Updated last year
- Predict prokaryotic host for phage metagenomic sequences☆57Sep 17, 2024Updated 2 years ago
- ☆15Dec 3, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ultrafast taxonomic profiling and genome querying for metagenomic samples by abundance-corrected minhash.☆333Oct 10, 2026Updated 3 weeks ago
- Contains a fasta format database of a large variety of mobile genetic elements and an annotation file☆55Aug 16, 2021Updated 5 years ago
- A fast and accurate binning refinement tool to constructs high quality MAGs from the output of multiple binning tools.☆58Sep 28, 2026Updated last month
- VirHostMatcher: matching hosts of viruses based on oligonucleotide frequency (ONF) comparison☆32Jul 28, 2018Updated 8 years ago
- Genomewide Epistasis Analysis on Bacteria☆15Aug 7, 2026Updated 3 months ago
- Gene Absence Presence Identification tool.☆27Mar 28, 2025Updated last year
- A deep learning based approach to predict Antibiotic Resistance Genes (ARGs) from metagenomes. It provides two models,deepARG-SS and deep…☆61Apr 30, 2026Updated 6 months ago
- An accurate and sensitive bacterial plasmid identification tool based on deep machine-learning of shared k-mers and genomic features.☆54Apr 20, 2023Updated 3 years ago
- Melon: metagenomic long-read-based taxonomic identification and quantification using marker genes☆38Jun 4, 2026Updated 5 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Nullomers Assessor: A computational method for statistical evaluation of nullomers & minimal absent words☆10Feb 20, 2023Updated 3 years ago
- 🫧🧬 From fragmented assemblies to high-quality bacteriophage genomes☆86Sep 7, 2026Updated last month
- This is the codebase for Recycler, described in our manuscript: https://academic.oup.com/bioinformatics/article/33/4/475/2623362, by Roye…☆58Apr 22, 2021Updated 5 years ago
- An R package for mitogenome assembly and annotation from genome skimming data that uses Nexflow and includes (Shiny) web app for project …☆10Updated this week
- ☆14Jul 30, 2026Updated 3 months ago
- Taxonomy manipulation for sylph (new version)☆12Sep 18, 2026Updated last month
- download isfinder database☆13Nov 9, 2018Updated 7 years ago
- Git repository containing the code and genomics data published in the article "Predicting phage-bacteria interactions at the strain level…☆13Jan 22, 2026Updated 9 months ago
- ☆13Sep 4, 2017Updated 9 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Rapidly extract reads from FASTX files based on taxonomic classification via Kraken2.☆16Jun 17, 2026Updated 4 months ago
- Prokaryotic virus Host Predictor (PHP) is a computational tool for host prediction of prokaryotic viruses based on Gaussian Model (GM). P…☆12Jan 8, 2021Updated 5 years ago
- The construction of reference gene catalog and metagenome-assembled genomes of pig gut microbiome.☆29Jul 21, 2022Updated 4 years ago
- Custom curriculum for teaching R, the Unix Shell, & Git with an integrated workflow and reproducible research practices.☆10Feb 25, 2026Updated 8 months ago
- ☆26Feb 7, 2022Updated 4 years ago
- Updates and maintenance of the Cohesion method for quantifying connectivity in microbial communities☆10May 9, 2018Updated 8 years ago
- SISTR (Salmonella In Silico Typing Resource) command-line tool☆39Apr 24, 2025Updated last year