biomed-AI / GraphPPISLinks
☆52Updated last year
Alternatives and similar repositories for GraphPPIS
Users that are interested in GraphPPIS are comparing it to the libraries listed below
Sorting:
- ☆86Updated 2 years ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆60Updated last year
- Graph Network for protein-protein interface☆120Updated last year
- Code of our JC paper: "Structure-aware protein solubility prediction from sequence through graph convolutional network and predicted cont…☆74Updated 3 years ago
- a novel DTA predition method using graph neural network☆74Updated 2 years ago
- Pretrainable geometric graph neural network for antibody affinity maturation☆60Updated 4 months ago
- ☆51Updated last year
- ☆40Updated last year
- A bi-directional attention neural network for compound–protein interaction and binding affinity prediction.☆32Updated 2 years ago
- open source repository☆139Updated last year
- A novel graph neural network strategy with the Vina distance optimization terms to predict protein-ligand binding affinity☆32Updated last year
- a deep learning architecture for protein-ligand binding affinity prediction☆76Updated last year
- Protein-protein interaction sites prediction through combining local and global features with deep neural networks☆54Updated 5 years ago
- ISMB-24/Bioinformatics: Tertiary Structure-based RNA Inverse Folding with Generative Diffusion Models☆50Updated 8 months ago
- ☆76Updated last year
- Protein-protein interacting site predictor using deep graph convolutional network☆11Updated 2 years ago
- ☆54Updated 11 months ago
- Antibody-Antigen Docking and Affinity Benchmark☆73Updated 4 years ago
- Multi-Scale Representation Learning on Proteins (NeurIPS 2021)☆46Updated 2 years ago
- ☆70Updated 4 years ago
- Intrinsic-Extrinsic Convolution and Pooling for Learning on 3D Protein Structures☆48Updated 3 years ago
- AlphaDrug: Protein Target Specific De Novo Molecular Generation☆40Updated 2 years ago
- ☆30Updated last year
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆114Updated 5 months ago
- Bioinformatics'2022 PerceiverCPI: A nested cross-attention network for compound-protein interaction prediction☆36Updated last year
- PocketDTA☆30Updated 9 months ago
- Code for "Protein Docking Model Evaluation by Graph Neural Networks"☆59Updated 2 years ago
- The Enhanced Database of Interacting Protein Structures for Interface Prediction☆49Updated last year
- A PyTorch implementation of GCN with mutual attention for protein-protein interaction prediction☆61Updated 3 years ago
- [ICLR2025] Official Implementation of IgGM: A Generative Model for Functional Antibody and Nanobody Design☆75Updated 2 months ago