biomed-AI / GraphPPISLinks
☆52Updated 10 months ago
Alternatives and similar repositories for GraphPPIS
Users that are interested in GraphPPIS are comparing it to the libraries listed below
Sorting:
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆59Updated 10 months ago
- ☆86Updated 2 years ago
- Protein-protein interacting site predictor using deep graph convolutional network☆12Updated 2 years ago
- ☆39Updated last year
- Pretrainable geometric graph neural network for antibody affinity maturation☆53Updated 2 months ago
- a deep learning architecture for protein-ligand binding affinity prediction☆74Updated last year
- A PyTorch implementation of GCN with mutual attention for protein-protein interaction prediction☆61Updated 3 years ago
- ☆51Updated 9 months ago
- Antibody-Antigen Docking and Affinity Benchmark☆71Updated 4 years ago
- Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)☆44Updated 4 months ago
- Learning Structure-based Pocket Representations for Protein-Ligand Interaction Prediction☆33Updated last year
- ☆44Updated last year
- ☆53Updated 9 months ago
- Protein-protein interaction sites prediction through combining local and global features with deep neural networks☆54Updated 5 years ago
- Multi-Scale Representation Learning on Proteins (NeurIPS 2021)☆46Updated last year
- A bi-directional attention neural network for compound–protein interaction and binding affinity prediction.☆30Updated 2 years ago
- Evaluating Protein Binding Interfaces with Transformer Networks☆45Updated last year
- Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model (NeurIPS 2023 Poster)☆35Updated last year
- ☆10Updated last year
- This repo contains the codes for our paper "Generalist Equivariant Transformer Towards 3D Molecular Interaction Learning" (ICML 2024).☆30Updated 8 months ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆109Updated 3 months ago
- ☆32Updated last year
- ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)☆100Updated last year
- ☆26Updated last year
- ☆48Updated last year
- PocketDTA☆30Updated 7 months ago
- A unified framework for predicting drug-target interactions, binding affinities and activation/inhibition mechanisms.☆42Updated 3 months ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆59Updated last year
- [NeurIPS 2023] DrugCLIP: Contrastive Protein-Molecule Representation Learning for Virtual Screening☆86Updated last year
- ISMB-24/Bioinformatics: Tertiary Structure-based RNA Inverse Folding with Generative Diffusion Models☆47Updated 6 months ago