Masked language models of biosynthetic gene clusters
☆18Jul 27, 2022Updated 3 years ago
Alternatives and similar repositories for bigcarp
Users that are interested in bigcarp are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆12Dec 10, 2024Updated last year
- A deep learning approach that leverages language processing neural network model to accurately identify known BGCs and extrapolate novel …☆26Jan 9, 2026Updated 5 months ago
- BGC Detection and Classification Using Deep Learning☆158Nov 11, 2023Updated 2 years ago
- SMBGC Annotation using Neural Networks Trained on Interpro Signatures☆30Mar 9, 2026Updated 3 months ago
- Raspir, the rare species identifier☆11Oct 19, 2023Updated 2 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- tree-aggregated compositional analysis for high-throughput sequencing data☆11Aug 24, 2022Updated 3 years ago
- ☆11Jun 21, 2025Updated 11 months ago
- incremental symbol learning for natural language understanding☆10Jun 12, 2023Updated 2 years ago
- ☆18Jun 1, 2026Updated last week
- 这里提供了一个yaml可以通过conda来快速无痛一键安装ESMfold，算是已经踩过所有通过官方安装遇到的暗坑了。☆18Jan 31, 2024Updated 2 years ago
- ☆18Mar 31, 2026Updated 2 months ago
- Neural Bacteriocin Identifier - a recurrent neural network based software to predict bacteriocins from protein sequences.☆18Mar 25, 2023Updated 3 years ago
- Generating Protein Variants with Different Generative Models (HMM, VAE, ESM-2, ProtGPT2)☆11Mar 14, 2024Updated 2 years ago
- This is for the AI enzyme design course☆19Nov 10, 2025Updated 7 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Python Implementation of Codon Adaption Index☆37Feb 1, 2023Updated 3 years ago
- A biological dual-language foundation model☆12Jun 16, 2025Updated 11 months ago
- ☆14Dec 10, 2018Updated 7 years ago
- ☆26Mar 14, 2026Updated 2 months ago
- From genomes to phenotypes: Traitar3, the microbial trait analyzer (for Python3)☆22Jul 8, 2024Updated last year
- ☆18Jun 20, 2025Updated 11 months ago
- ☆18Jan 2, 2025Updated last year
- ☆16Mar 1, 2025Updated last year
- ☆19Sep 9, 2025Updated 9 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- DeepSoluE☆18Sep 18, 2023Updated 2 years ago
- ☆258Jul 31, 2024Updated last year
- ☆19Nov 26, 2020Updated 5 years ago
- DeepECtransformer☆30Oct 20, 2023Updated 2 years ago
- NRPSpredictor2 is a program to predict the specificity of bacterial and fungal adenylation domains.☆11Oct 7, 2019Updated 6 years ago
- Machine learning for accurate identification and classification of CRISPR-Cas systems☆23Dec 20, 2024Updated last year
- This repository contains the codebase for the paper "Leveraging ancestral sequence reconstruction for protein representation learning".☆13Apr 13, 2025Updated last year
- ☆16Feb 14, 2025Updated last year
- ☆16Aug 22, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- QLoRA for Masked Language Modeling☆24Sep 11, 2023Updated 2 years ago
- ☆13Aug 18, 2023Updated 2 years ago
- ☆20Nov 21, 2025Updated 6 months ago
- Python package to study microbial communities using metabolic modeling.☆129Updated this week
- MAG Circularization Method☆33Nov 4, 2025Updated 7 months ago
- An R package for visualizing confounder control in meta-analyses☆11Jan 17, 2023Updated 3 years ago
- ☆21Oct 22, 2024Updated last year