micro-manager / futureMMCore
Place to discuss the future design of a universal microscope hardware interface
☆15Updated 3 years ago
Related projects ⓘ
Alternatives and complementary repositories for futureMMCore
- An implementation agnostic schema for describing a sequence of events during a multi-dimensional imaging acquisition.☆16Updated this week
- A set of Qt-based widgets onto the pymmcore-plus model☆12Updated this week
- Pure python/C++ micro-manager ecosystem☆32Updated this week
- Acquire: a multi-camera video streaming software focusing on microscopy☆18Updated 3 weeks ago
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆12Updated last week
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆57Updated this week
- GUI interface between napari and micromanager powered by pymmcore-plus and pymmcore-widgets☆61Updated last week
- Browse your OMERO database from within napari.☆33Updated 2 weeks ago
- 1d plotting in napari-based canvas.☆24Updated this week
- A napari plugin for zarr backed OME-NGFF images☆30Updated this week
- Control, reconstruction, and analysis code for oblique plane microscopy.☆21Updated 3 months ago
- ImSwitch is a software solution in Python that aims at generalizing microscope control by providing a solution for flexible control of mu…☆70Updated last month
- Image reading, metadata management, and image writing for Microscopy images in Python☆54Updated 3 weeks ago
- Python bindings for MMCore, Micro-Manager's device control layer☆33Updated last month
- native Python dataclasses for the OME data model☆53Updated this week
- A hub to start the next generation of Microscope Control Software☆53Updated 3 years ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆60Updated 2 weeks ago
- A Board Game to teach co-localization analysis☆12Updated 3 weeks ago
- napari plugin for trackastra☆13Updated last month
- Paint segmentations directly to on-disk/remote zarr arrays☆14Updated 4 months ago
- Image acquisition software for mesoSPIM light-sheet microscopes.☆37Updated this week
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Updated 3 months ago
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆19Updated 3 weeks ago
- navigate - open source light-sheet microscope controls☆32Updated this week
- Denoising via adaptive binning.☆12Updated 4 months ago
- ☆43Updated last month
- A napari plugin to view and edit metadata☆10Updated last year
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆37Updated last month
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆23Updated last week
- Segment images by pixel classification based on pre-trained convolutional layer feature extraction☆23Updated last month