[DEPREACATED] Python interface for data-driven microscopy with Micro-manager/Micro-Magellan
☆14May 13, 2020Updated 6 years ago
Alternatives and similar repositories for Pygellan
Users that are interested in Pygellan are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ImJoy Plugin Engine for running Python plugins locally or remotely from ImJoy.io☆18Aug 16, 2022Updated 3 years ago
- Software for camera acquisition and tracking of particles☆11Nov 22, 2022Updated 3 years ago
- Python bindings for scalar and vectorial models of the 3D microscope point spread function.☆57May 20, 2024Updated 2 years ago
- Various parts made for fluorescence microscopy + optics work☆17Jul 22, 2019Updated 6 years ago
- ☆18Updated this week
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆23Apr 1, 2025Updated last year
- GPU accelerated beam propagation tools for biological light tissue simulations☆37Sep 29, 2018Updated 7 years ago
- Janelia Workstation☆28Jun 23, 2026Updated last week
- Python control of micro-manager for customized data acquisition☆184Jun 17, 2026Updated 2 weeks ago
- Liquid handling robot for in situ serial multiplexing☆18Apr 7, 2017Updated 9 years ago
- TensorFlow Deconvolution for Microscopy Data☆93Apr 29, 2022Updated 4 years ago
- Running compute-intense parts of BigStitcher distributed☆30Updated this week
- ☆24Jun 15, 2015Updated 11 years ago
- A simple React component to build a Web File Manager☆22Apr 17, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- poppy derivatives☆22Aug 13, 2021Updated 4 years ago
- Software for the reconstruction of multi-view microscopic acquisitions like Selective Plane Illumination Microscopy (SPIM) Data☆33Jun 23, 2026Updated last week
- ImageJ plugins for blind decomposition of fluorencence microscopy data☆10Mar 24, 2015Updated 11 years ago
- python functions for simulating optical transfer functions☆84Apr 8, 2024Updated 2 years ago
- Arduino Serial Data Viewer☆10Jan 28, 2021Updated 5 years ago
- Contains information and links for the tufts face database☆19Dec 3, 2025Updated 7 months ago
- Notebooks to illustrate how BigFISH is working.☆12Sep 5, 2022Updated 3 years ago
- A hub to start the next generation of Microscope Control Software☆60Jan 7, 2021Updated 5 years ago
- Old academic project for my PhD - no longer maintained by me: fast gaussian and derivative convolutional filters☆10May 1, 2019Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Thesis template in Word | CC BY-NC-SA 4.0☆21Sep 29, 2025Updated 9 months ago
- Library for solving the macroscopic Maxwell equations in complex dielectric materials. The materials may be any mixture of isotropic and …☆25Sep 26, 2025Updated 9 months ago
- Designs for 3D printed parts that were developed in the Zhuang Lab.☆11Dec 2, 2020Updated 5 years ago
- GUI interface between napari and micromanager powered by pymmcore-plus and pymmcore-widgets☆78Jun 1, 2026Updated last month
- Library for producing and processing on the Adaptive Particle Representation (APR).☆51Jan 20, 2026Updated 5 months ago
- Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer☆12Aug 13, 2021Updated 4 years ago
- Acquire bright field images along with the super resolution data and use it to track drift in 3D with nanometer precision!☆11Jun 22, 2023Updated 3 years ago
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆96Jun 1, 2026Updated last month
- Baxter-like robotic arm that can be trained with human hands and a button press.☆17Aug 18, 2022Updated 3 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Code for simulating a multi-view acquisition including attenuation, convolution, reduced sampling and poission noise☆13Jun 15, 2026Updated 2 weeks ago
- An Avisynth plug-in filter for spatial/temporal non-local means de-noising☆15Jul 29, 2016Updated 9 years ago
- Read ROI files .zip or .roi generated with ImageJ.☆53Jun 1, 2022Updated 4 years ago
- AutoPilot library☆15Nov 15, 2016Updated 9 years ago
- Adaptive Optics plugin for MicroManager☆13May 23, 2022Updated 4 years ago
- Schema.org Data Models for HTAN☆15Sep 4, 2025Updated 9 months ago
- under construction☆14Apr 20, 2017Updated 9 years ago