henrypinkard / Pygellan
[DEPREACATED] Python interface for data-driven microscopy with Micro-manager/Micro-Magellan
☆14Updated 4 years ago
Alternatives and similar repositories for Pygellan:
Users that are interested in Pygellan are comparing it to the libraries listed below
- Things we use regularly☆29Updated 6 months ago
- Control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated last month
- Image acquisition software for mesoSPIM light-sheet microscopes.☆41Updated this week
- GDSC Single Molecule Light Microscopy ImageJ Plugins☆16Updated last month
- GUI interface between napari and micromanager powered by pymmcore-plus and pymmcore-widgets☆62Updated 2 weeks ago
- Detection of Molecules plugin for ImageJ, Utrecht University☆15Updated 2 years ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆39Updated 4 months ago
- Acquire: a multi-camera video streaming software focusing on microscopy☆20Updated 4 months ago
- Python bindings for scalar and vectorial models of the 3D microscope point spread function.☆49Updated 10 months ago
- ☆13Updated 2 months ago
- Various parts made for fluorescence microscopy + optics work☆16Updated 5 years ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆63Updated 2 weeks ago
- GPU accelerated beam propagation tools for biological light tissue simulations☆35Updated 6 years ago
- CUDA-accelerated reconstruction for 3D-structured-illumination☆9Updated 7 months ago
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆25Updated 4 years ago
- An implementation agnostic schema for describing a sequence of events during a multi-dimensional imaging acquisition.☆17Updated this week
- Lattice light-sheet post-processing utility.☆28Updated 2 weeks ago
- MSSR Plugin☆13Updated 4 months ago
- ☆12Updated 4 months ago
- ☆10Updated 3 months ago
- High-Resolution, Large Field-of-View, and Multi-ViewSingle Objective Light-Sheet Microscopy☆27Updated 6 months ago
- Place to discuss the future design of a universal microscope hardware interface☆15Updated 3 years ago
- Drift estimation☆15Updated last year
- Pure python/C++ micro-manager ecosystem☆35Updated this week
- ☆12Updated 4 years ago
- Fluorescence Lifetime Ultimate Explorer (FLUTE) is a GUI for exploring and analyzing Fluorescence Lifetime Microscopy (FLIM) data☆27Updated 3 months ago
- code of the registration and deconvolution project☆34Updated 3 years ago
- 1d plotting in napari-based canvas.☆26Updated this week
- Z-stack Depth Colorcode ImageJ FIJI plugin☆24Updated 4 years ago