henrypinkard / PygellanLinks
[DEPREACATED] Python interface for data-driven microscopy with Micro-manager/Micro-Magellan
☆14Updated 5 years ago
Alternatives and similar repositories for Pygellan
Users that are interested in Pygellan are comparing it to the libraries listed below
Sorting:
- Python bindings for scalar and vectorial models of the 3D microscope point spread function.☆50Updated last year
- ☆12Updated 11 months ago
- GPU accelerated beam propagation tools for biological light tissue simulations☆37Updated 7 years ago
- Adaptive Optics plugin for MicroManager☆12Updated 3 years ago
- Musical for ImageJ☆11Updated 2 years ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆42Updated 11 months ago
- Various parts made for fluorescence microscopy + optics work☆16Updated 6 years ago
- Pure Python Micro-Manager GUI Application, built on pymmcore-plus☆15Updated last month
- Things we use regularly☆29Updated 2 months ago
- Wave optical models and inverse algorithms for label-agnostic imaging of density & orientation.☆34Updated last month
- CUDA-accelerated reconstruction for 3D-structured-illumination☆10Updated last month
- GDSC Single Molecule Light Microscopy ImageJ Plugins☆16Updated last month
- GUI interface between napari and micromanager powered by pymmcore-plus and pymmcore-widgets☆72Updated this week
- ☆10Updated 10 months ago
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated 6 months ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆68Updated this week
- Code and data belonging to "Raw data to results: a hands-on introduction and overview of computational analysis for single-molecule local…☆11Updated 3 years ago
- A Python software library with a variety of functions for (optical) microscopy image restoration, reconstruction and analysis.☆79Updated last month
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆27Updated 5 years ago
- TensorFlow Deconvolution for Microscopy Data☆90Updated 3 years ago
- ThunderSTORM: a comprehensive ImageJ plugin for SMLM data analysis and super-resolution imaging☆103Updated 7 years ago
- A hub to start the next generation of Microscope Control Software☆56Updated 4 years ago
- Acquire: a multi-camera video streaming software focusing on microscopy☆22Updated 11 months ago
- High-Resolution, Large Field-of-View, and Multi-ViewSingle Objective Light-Sheet Microscopy☆29Updated last year
- Drift estimation☆16Updated 2 years ago
- Image acquisition software for mesoSPIM light-sheet microscopes.☆43Updated last week
- The python-microscopy environment - an open-source package for light microscopy☆90Updated 2 months ago
- Fluorescence Lifetime Ultimate Explorer (FLUTE) is a GUI for exploring and analyzing Fluorescence Lifetime Microscopy (FLIM) data☆28Updated 10 months ago
- Lattice light-sheet post-processing utility.☆29Updated this week
- SOFI simulation tool: a software package for simulating and testing super-resolution optical fluctuation imaging☆16Updated 8 years ago