radioxoma / micromanager-samples
Python samples for Micro-Manager: image acquisition and microscope control system
☆22Updated 5 years ago
Alternatives and similar repositories for micromanager-samples:
Users that are interested in micromanager-samples are comparing it to the libraries listed below
- Image acquisition software for mesoSPIM light-sheet microscopes.☆41Updated this week
- GUI interface between napari and micromanager powered by pymmcore-plus and pymmcore-widgets☆62Updated 2 weeks ago
- [DEPREACATED] Python interface for data-driven microscopy with Micro-manager/Micro-Magellan☆14Updated 4 years ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆39Updated 4 months ago
- GPU accelerated beam propagation tools for biological light tissue simulations☆35Updated 6 years ago
- Hardware documentation for the mesoSPIM microscope project☆34Updated 5 months ago
- Things we use regularly☆29Updated 6 months ago
- Place to discuss the future design of a universal microscope hardware interface☆15Updated 3 years ago
- Microscope control software☆67Updated last month
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆63Updated 2 weeks ago
- Config and scripts used to run a Nikon Eclipse Ti in the vanNimwegen lab.☆22Updated 8 months ago
- An implementation agnostic schema for describing a sequence of events during a multi-dimensional imaging acquisition.☆17Updated last week
- A hub to start the next generation of Microscope Control Software☆55Updated 4 years ago
- Control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated last month
- Z-stack Depth Colorcode ImageJ FIJI plugin☆24Updated 4 years ago
- Python bindings for MMCore, Micro-Manager's device control layer☆34Updated this week
- Pure python/C++ micro-manager ecosystem☆35Updated this week
- High-Resolution, Large Field-of-View, and Multi-ViewSingle Objective Light-Sheet Microscopy☆27Updated 6 months ago
- Software for camera acquisition and tracking of particles☆11Updated 2 years ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Updated 7 months ago
- CUDA-accelerated reconstruction for 3D-structured-illumination☆9Updated 7 months ago
- Automatic Correction for sCMOS-related Noise☆17Updated 3 years ago
- GDSC Single Molecule Light Microscopy ImageJ Plugins☆16Updated last month
- ImageJ convenience layer for N5☆16Updated this week
- Python bindings for scalar and vectorial models of the 3D microscope point spread function.☆49Updated 10 months ago
- Acquire: a multi-camera video streaming software focusing on microscopy☆21Updated 4 months ago
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆25Updated 4 years ago
- Seeded Iterative Demixing (SID) of neuronal activity recordings made using Light Field Microscopy (LFM)☆27Updated 5 years ago
- Cockpit is a microscope graphical user interface. It is a flexible and easy to extend platform aimed at life scientists using bespoke mic…☆38Updated 3 weeks ago
- ImSwitch is a software solution in Python that aims at generalizing microscope control by providing a solution for flexible control of mu…☆74Updated 5 months ago