radioxoma / micromanager-samplesView external linksLinks
Python samples for Micro-Manager: image acquisition and microscope control system
☆22Sep 26, 2019Updated 6 years ago
Alternatives and similar repositories for micromanager-samples
Users that are interested in micromanager-samples are comparing it to the libraries listed below
Sorting:
- Micro-Manager Open Source Microscopy Software (http://valelab.ucsf.edu/~MM/MMwiki/). SVN-tracking Git repository☆15Jul 14, 2016Updated 9 years ago
- Config and scripts used to run a Nikon Eclipse Ti in the vanNimwegen lab.☆22Jul 8, 2024Updated last year
- A Micro-Manager plugin that loads easily reconfigurable user interfaces.☆11Aug 30, 2023Updated 2 years ago
- Official python package for Cobolt Lasers☆11Sep 15, 2025Updated 4 months ago
- Motion Tracking☆14Jan 12, 2023Updated 3 years ago
- Commands and Classes for interfacing between Imaris and Fiji☆13Sep 30, 2024Updated last year
- Visualization of fluorescent protein properties with d3.js. Obsolete.☆12Mar 12, 2024Updated last year
- Place to discuss the future design of a universal microscope hardware interface☆15May 18, 2021Updated 4 years ago
- A convex 3D deconvolution algorithm for low photon count fluorescence imaging☆33Feb 9, 2022Updated 4 years ago
- Image acquisition software for mesoSPIM light-sheet microscopes.☆45Updated this week
- ☆24Jun 15, 2015Updated 10 years ago
- A testing pipeline that allows us to run a behavioural phenotyping of our virtual worm running the same test statistics the Schafer Lab u…☆48Jan 16, 2020Updated 6 years ago
- Microscope control and image acquisition integrated with ImageJ☆292Feb 7, 2026Updated last week
- A universal MATLAB driver for Basler cameras☆22Jul 27, 2018Updated 7 years ago
- I/O operations for OME-TIFF files in Julia☆25Nov 1, 2024Updated last year
- DAQmx Examples using MATLAB☆29Feb 2, 2026Updated last week
- Multi-Worm Behaviour Tracker☆26Nov 26, 2020Updated 5 years ago
- Seeded Iterative Demixing (SID) of neuronal activity recordings made using Light Field Microscopy (LFM)☆28Feb 26, 2020Updated 5 years ago
- native Python dataclasses for the OME data model☆65Feb 2, 2026Updated last week
- ☆30Mar 15, 2021Updated 4 years ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆71Feb 2, 2026Updated last week
- Library for Image Acquisition☆39Jan 29, 2026Updated 2 weeks ago
- Python bindings for MMCore, Micro-Manager's device control layer☆35Dec 16, 2025Updated last month
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Aug 22, 2024Updated last year
- python functions for simulating optical transfer functions☆81Apr 8, 2024Updated last year
- NTNU NanoLab process database☆15Apr 1, 2025Updated 10 months ago
- Designs for 3D printed parts that were developed in the Zhuang Lab.☆11Dec 2, 2020Updated 5 years ago
- Instrument Control for Microscopes and Accessories☆12Jan 31, 2019Updated 7 years ago
- Front-end web for CCSE Open Source Mirrors☆14Jan 7, 2026Updated last month
- This repository contains the scripts for reproducing the results presented in Costa AC, Ahamed T, Jordan D, Stephens GJ (2023) "A Markov…☆11Sep 25, 2025Updated 4 months ago
- Arduino Communication through Serial☆13Oct 11, 2023Updated 2 years ago
- ☆13Feb 5, 2026Updated last week
- Interactive map of neural connections in the nematode C. elegans. Online at http://nemanode.org.☆11May 30, 2024Updated last year
- A python port of the Single Molecule Tools software by Adam Wollman, aka. ADEMSCode.☆11Sep 30, 2021Updated 4 years ago
- A Graphical program to Manage, Configure, Launch, and Monitor an INDI WebManager on OS X and Linux☆11Oct 12, 2024Updated last year
- InVivoTools a set of neurophysiology tools, forked from VanHooserTools, containing tools for visual stimulation and analysis of calcium i…☆14Oct 12, 2025Updated 4 months ago
- GPU-accelerated image processing in Matlab using CLIJ☆11Oct 30, 2021Updated 4 years ago
- Implementation of Mejias et al. 2016: Feedforward and feedback frequency-dependent interactions in a large-scale laminar network of the p…☆10Nov 25, 2025Updated 2 months ago
- Exposes macOS's native image IO functionality to Julia☆12Apr 8, 2024Updated last year