hammerlab / flowdec
TensorFlow Deconvolution for Microscopy Data
☆90Updated 2 years ago
Alternatives and similar repositories for flowdec:
Users that are interested in flowdec are comparing it to the libraries listed below
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆39Updated 4 months ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆63Updated 2 weeks ago
- Things we use regularly☆29Updated 6 months ago
- High-Resolution, Large Field-of-View, and Multi-ViewSingle Objective Light-Sheet Microscopy☆27Updated 6 months ago
- CLIJ is deprecated. Visit CLIJ2☆56Updated 3 years ago
- Official implementation of the Optica 2018 paper "Deep-STORM: super-resolution single-molecule microscopy by deep learning"☆56Updated 4 years ago
- A general illumination correction method for optical microscopy.☆39Updated 3 years ago
- Image acquisition software for mesoSPIM light-sheet microscopes.☆40Updated last week
- Accelerating Single Molecule Localization Microscopy with Deep Learning☆51Updated last year
- Python bindings for scalar and vectorial models of the 3D microscope point spread function.☆49Updated 10 months ago
- Core functionality of NanoJ☆15Updated 11 months ago
- code of the registration and deconvolution project☆34Updated 3 years ago
- Parts list and build instructions for our high-numerical-aperture lightsheet. Read the publication here: https://andrewgyork.github.io/hi…☆22Updated 9 months ago
- STORM movie analysis code☆118Updated last year
- A Python software library with a variety of functions for (optical) microscopy image restoration, reconstruction and analysis.☆76Updated 3 years ago
- A python library for advanced lattice light-sheet image analysis☆21Updated 4 years ago
- GPU accelerated 3D image deconvolution using CUDA☆35Updated 8 months ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Updated 6 months ago
- Microscope control software☆67Updated last month
- MSSR Plugin☆13Updated 4 months ago
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆25Updated 4 years ago
- A collection of useful python utilities from True North Intelligent Algorithms☆33Updated last week
- A BaSiC Tool for Background and Shading Correction of Optical Microscopy Images☆55Updated last week
- ThunderSTORM: a comprehensive ImageJ plugin for SMLM data analysis and super-resolution imaging☆96Updated 6 years ago
- GPU accelerated beam propagation tools for biological light tissue simulations☆35Updated 6 years ago
- Z-stack Depth Colorcode ImageJ FIJI plugin☆24Updated 4 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆55Updated last month
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆39Updated 3 months ago
- Wave optical models and inverse algorithms for label-agnostic imaging of density & orientation.☆22Updated last week
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆26Updated 4 months ago