Alternatives and similar repositories for flowdec

Users that are interested in flowdec are comparing it to the libraries listed below

• MicroscPSF / MicroscPSF-Py
  Fast and Accurate 3D PSF Computation for Fluorescence Microscopy
  ☆42Updated 10 months ago
• ZhuangLab / storm-analysis
  STORM movie analysis code
  ☆121Updated last year
• tlambert03 / pycudadecon
  Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy
  ☆67Updated last week
• smithk / cidre
  A general illumination correction method for optical microscopy.
  ☆42Updated 4 years ago
• tlambert03 / LLSpy
  Lattice light-sheet post-processing utility.
  ☆29Updated 2 weeks ago
• imodpasteur / ANNA-PALM
  Accelerating Single Molecule Localization Microscopy with Deep Learning
  ☆51Updated 2 years ago
• AndrewGYork / tools
  Things we use regularly
  ☆29Updated last month
• zitmen / thunderstorm
  ThunderSTORM: a comprehensive ImageJ plugin for SMLM data analysis and super-resolution imaging
  ☆102Updated 7 years ago
• sakoho81 / miplib
  A Python software library with a variety of functions for (optical) microscopy image restoration, reconstruction and analysis.
  ☆80Updated 3 weeks ago
• funkelab / gunpowder
  A library to facilitate machine learning on multi-dimensional images.
  ☆86Updated 2 weeks ago
• royerlab / daxi
  High-Resolution, Large Field-of-View, and Multi-ViewSingle Objective Light-Sheet Microscopy
  ☆29Updated last year
• royerlab / dexp
  Dataset EXploration & Processing
  ☆32Updated 2 years ago
• nvladimus / npy2bdv
  Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.
  ☆34Updated last year
• PreibischLab / BigStitcher
  ImgLib2/BDV implementation of Stitching for large datasets
  ☆74Updated last month
• VolkerH / Lattice_Lightsheet_Deskew_Deconv
  Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data
  ☆27Updated 5 years ago
• eguomin / regDeconProject
  code of the registration and deconvolution project
  ☆35Updated 4 years ago
• cmongis / psfj
  PSFj - Know your microscope fluorescence
  ☆21Updated 5 years ago
• clij / clij
  CLIJ is deprecated. Visit CLIJ2
  ☆56Updated 4 years ago
• bene51 / 3Dscript
  Create 3D/4D animations using a natural language-based syntax
  ☆60Updated 3 months ago
• scopetools / cudadecon
  GPU accelerated 3D image deconvolution using CUDA
  ☆36Updated last year
• True-North-Intelligent-Algorithms / tnia-python
  A collection of useful python utilities from True North Intelligent Algorithms
  ☆41Updated last week
• marrlab / BaSiC
  A BaSiC Tool for Background and Shading Correction of Optical Microscopy Images
  ☆62Updated 6 months ago
• PRNicovich / 3D-Printed-Optics-Lab-Parts
  Various parts made for fluorescence microscopy + optics work
  ☆16Updated 6 years ago
• UU-cellbiology / ZstackDepthColorCode
  Z-stack Depth Colorcode ImageJ FIJI plugin
  ☆24Updated 2 weeks ago
• guiwitz / naparimovie
  Create movies from series of key-frames in napari.
  ☆38Updated 4 years ago
• haesleinhuepf / apoc
  Accelerated Pixel and Object Classifiers (APOC)
  ☆56Updated 2 months ago
• glichtner / pystackreg
  A python extension for the automatic alignment of a source image or a stack (movie) to a target image/reference frame.
  ☆91Updated 10 months ago
• funkelab / daisy
  Block-wise task scheduling for large nD volumes.
  ☆32Updated 5 months ago
• henrypinkard / Pygellan
  [DEPREACATED] Python interface for data-driven microscopy with Micro-manager/Micro-Magellan
  ☆14Updated 5 years ago
• AiviaCommunity / 3D-RCAN
  Three-dimensional residual channel attention networks
  ☆55Updated 2 years ago