magnusmanske / lookseq
☆5Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for lookseq
- AccuSyn: An Accurate Web-based Genome Synteny Browser☆16Updated 2 months ago
- Multiple sequence alignment browser☆11Updated last year
- Convert genbank files to a swath of other formats☆14Updated last year
- Tool package to perform in-silico CRISPR analysis and assessment☆22Updated 6 months ago
- Phylogeny-based Contamination Detection in Mitochondrial and Whole-Genome Sequencing Studies☆16Updated last year
- A JBrowse plugin to view multiple alignment format (MAF) files☆26Updated last year
- An insertion caller for Illumina paired-end WGS data.☆22Updated 3 months ago
- program for haplotype phasing from sequence reads and related tools☆25Updated 5 years ago
- Mark duplicate reads from PacBio sequencing of an amplified library☆10Updated 3 weeks ago
- ☆14Updated 3 years ago
- POSTRE: Prediction Of STRuctural variant Effects☆21Updated 2 months ago
- DNA multiple sequence aligner, official version from Penn State's Miller Lab☆31Updated 5 years ago
- Improvement of Long Read Assemblies (ILRA) is a pipeline to help in the post assembly process (finishing) by cleaning and merging contigs…☆10Updated 2 weeks ago
- GRAbB (Genome Region Assembly by Baiting) is a program designed to assemble selected regions of the genome or transcriptome using referen…☆11Updated 4 years ago
- BED QC tool (in the making)☆15Updated 2 years ago
- Generating UTRs from SHort Reads☆11Updated 4 years ago
- Minor Variant Calling and Phasing Tools☆15Updated 2 years ago
- Galaxy Docker Image with Tools for Genome Annotation☆11Updated 3 years ago
- GOMCL: a toolkit to cluster, evaluate, and extract non-redundant associations of Gene Ontology-based functions☆20Updated last year
- 🍶 Genome assembly with short sequence reads☆25Updated 10 months ago
- This tools counts the number of specific k-mers within sequence data. The counts can then be compare to other counts to determine to comp…☆25Updated this week
- Human pan-genome analysis pipeline☆29Updated 4 years ago
- What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.☆29Updated last year
- OrthoFiller: Identifying missing annotations for evolutionarily conserved genes.☆22Updated last year
- http://www.combio.pl/alfree☆22Updated 2 years ago
- Toolkit for calling and analyzing de novo STR mutations☆13Updated 11 months ago
- A transposition caller.☆10Updated last year
- Fast in-silico normalization algorithm for NGS data☆22Updated 3 years ago
- All JBrowse plugins created by Brigitte Hofmeister☆10Updated 6 years ago
- ☆26Updated 3 years ago