Official implementation of MuViT (CVPR 2026), a ViT-based architecture for multi-scale modelling of gigapixel microscopy images.
☆43Jun 7, 2026Updated 2 months ago
Alternatives and similar repositories for muvit
Users that are interested in muvit are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Light microscopy simulation in python.☆55Updated this week
- A napari plugin to view and edit layer metadata☆13Updated this week
- Modern Bio-Formats wrapper with clean lazy Python API☆23Jun 25, 2026Updated last month
- Browse, share, and publish OME-Zarr data☆29Updated this week
- A minimal dependency napari plugin giving access to scikit-image functions☆23Jul 6, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ngio is a Python library to streamline OME-Zarr image analysis workflows.☆50Updated this week
- Guide to python package development for scientists☆27Updated this week
- Image reading, metadata management, and image writing for Microscopy images in Python☆126Updated this week
- Block-wise operations for large nD volumes☆45Updated this week
- Efficient graph data structures and algorithms for fast slicing, visualization, and editing☆13Jul 1, 2026Updated last month
- GPU-accelerated Image Processing library for Python☆63Updated this week
- Pydantic models for OME-NGFF☆24Sep 14, 2025Updated 10 months ago
- Accurate and efficient spot detection for microscopy data☆138Jun 8, 2026Updated 2 months ago
- A napari plugin for making image annotation using feature space of vision transformers and Random Forest classifier☆23Nov 24, 2025Updated 8 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆16Updated this week
- Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata☆55Updated this week
- Segment images utilizing pre-trained neural networks as feature extractors☆52Jul 3, 2026Updated last month
- Transformer-based cell tracking for live-cell microscopy☆143Updated this week
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆19Jul 26, 2026Updated 2 weeks ago
- A framework for easy application of established machine learning techniques on large, multi-dimensional images.☆61Apr 24, 2026Updated 3 months ago
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆98Updated this week
- Automated batch processing of cell and tissue microscopy image data in Napari☆22Updated this week
- Interprocess environment manager 🧊☆15May 11, 2026Updated 2 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆29Aug 29, 2024Updated last year
- Image registration (alignment) software for large microscopy images☆27Oct 15, 2023Updated 2 years ago
- Basic example of using OME-Zarr in a Nextflow pipeline☆21Jul 15, 2025Updated last year
- A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)☆20Updated this week
- GPU-based 3D non-rigid volumetric registration☆49Aug 26, 2025Updated 11 months ago
- Create web-based OME-Zarr galleries☆26Jul 7, 2026Updated last month
- ☆26Updated this week
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Jun 5, 2024Updated 2 years ago
- Acquire: a multi-camera video streaming software focusing on microscopy☆26Oct 30, 2024Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- This repository provides a collection of tools to simplify reading CZI (Carl Zeiss Image) pixel and metadata in Python.☆22Aug 2, 2026Updated last week
- Tools for handling FIB-SEM data and annotations☆21Apr 4, 2025Updated last year
- A napari plugin for direct 3D cell segmentation -- taking you through training, inference, and review of masks☆123May 22, 2026Updated 2 months ago
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆57Nov 13, 2025Updated 8 months ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆47Dec 4, 2025Updated 8 months ago
- Distributed image processing☆227Aug 3, 2026Updated last week
- Scalable Optical Flow-based Image Montaging and Alignment☆96Updated this week