Alternatives and similar repositories for latch:

Users that are interested in latch are comparing it to the libraries listed below

• jmschrei / tangermeme
  Biological sequence analysis for the modern age.
  ☆207Updated 2 months ago
• google / deepsomatic
  DeepSomatic is an analysis pipeline that uses a deep neural network to call somatic variants from tumor-normal and tumor-only sequencing …
  ☆161Updated 2 months ago
• latch-verified / bulk-rnaseq
  Bulk RNA-seq analysis.
  ☆34Updated last year
• JLSteenwyk / latch_library
  A library of code snippets used in Latch SDK development
  ☆11Updated last year
• calico / borzoi
  RNA-seq prediction with deep convolutional neural networks.
  ☆122Updated 2 months ago
• gosling-lang / gos
  A declarative interactive genomics visualization library for Python.
  ☆222Updated 3 weeks ago
• omgenomics / bio-data-zoo
  Example genomics data for tool developers
  ☆110Updated 7 months ago
• vanheeringen-lab / genomepy
  genes and genomes at your fingertips
  ☆386Updated 2 months ago
• Genentech / gReLU
  gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.
  ☆245Updated this week
• google / deepconsensus
  DeepConsensus uses gap-aware sequence transformers to correct errors in Pacific Biosciences (PacBio) Circular Consensus Sequencing (CCS) …
  ☆233Updated 4 months ago
• Lattice-Automation / seqfold
  nucleic acid folding
  ☆88Updated 6 months ago
• nf-core / proteinfold
  Protein 3D structure prediction pipeline
  ☆70Updated this week
• bioconvert / bioconvert
  Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.
  ☆375Updated last year
• modernatx / seqlike
  Unified biological sequence manipulation in Python
  ☆208Updated 8 months ago
• scverse / muon
  muon is a multimodal omics Python framework
  ☆226Updated 3 weeks ago
• laminlabs / lamindb
  A data framework for biology.
  ☆137Updated this week
• GoekeLab / bioinformatics-workflows
  minimal example implementations for bioinformatics workflow managers
  ☆269Updated 3 years ago
• zaneveld / full_spectrum_bioinformatics
  An open-access bioinformatics text
  ☆105Updated last month
• pinellolab / CRISPResso2
  Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments
  ☆292Updated last month
• pydna-group / pydna
  Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning…
  ☆174Updated this week
• google-research / proteinfer
  Deep networks for protein functional inference
  ☆166Updated 3 months ago
• pachterlab / ffq
  A tool to find sequencing data and metadata from public databases.
  ☆565Updated 6 months ago
• lynnlangit / aws-for-bioinformatics
  AWS for Bioinformatics Researchers
  ☆137Updated 5 months ago
• nahid18 / Awesome-LatchBio
  A curated list of awesome Bioinformatics pipelines and software available on LatchBio
  ☆15Updated 2 years ago
• GuyTeichman / RNAlysis
  Analyze your RNA sequencing data without writing a single line of code
  ☆131Updated 3 weeks ago
• helicalAI / helical
  This repository contains the python package for Helical
  ☆92Updated this week
• churchmanlab / genewalk
  GeneWalk identifies relevant gene functions for a biological context using network representation learning
  ☆130Updated 6 months ago
• pyranges / pyranges
  Performant Pythonic GenomicRanges
  ☆453Updated 8 months ago
• Edinburgh-Genome-Foundry / DnaChisel
  A versatile DNA sequence optimizer
  ☆229Updated this week
• Lattice-Automation / seqviz
  a JavaScript DNA, RNA, and protein sequence viewer
  ☆260Updated last month