Alternatives and similar repositories for latch_library

Users that are interested in latch_library are comparing it to the libraries listed below

• nahid18 / Awesome-LatchBio
  A curated list of awesome Bioinformatics pipelines and software available on LatchBio
  ☆15Updated 3 years ago
• bionumpy / bionumpy
  Python library for array programming on biological datasets. Documentation available at: https://bionumpy.github.io/bionumpy/
  ☆286Updated 3 months ago
• jmschrei / tangermeme
  Biological sequence analysis for the modern age.
  ☆250Updated 3 weeks ago
• urmi-21 / orfipy
  Fast and flexible ORF finder
  ☆76Updated 3 years ago
• iraiosub / riboseq-flow
  A Nextflow DSL2 pipeline to perform ribo-seq data analysis and comprehensive quality control.
  ☆15Updated last month
• latch-verified / bulk-rnaseq
  Bulk RNA-seq analysis.
  ☆35Updated last year
• snugel / cas-offinder
  An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.
  ☆94Updated 3 years ago
• CompEpigen / figeno
  Tool for plotting sequencing data along genomic coordinates.
  ☆319Updated 3 months ago
• mmcguffi / pLannotate
  Webserver and command line tool for annotating engineered plasmids
  ☆131Updated 2 months ago
• Weeks-UNC / shapemapper2
  Public repository for ShapeMapper 2 releases
  ☆39Updated 10 months ago
• rcedgar / muscle
  Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, e…
  ☆251Updated last month
• jzhoulab / puffin
  deep learning-inspired explainable sequence model for transcription initiation
  ☆96Updated 7 months ago
• ANHIG / IMGTHLA
  Github for files currently published in the IPD-IMGT/HLA FTP Directory hosted at the European Bioinformatics Institute
  ☆242Updated this week
• evanpeikon / math_for_compbio
  This repository contains math tutorials I created for Bioinformatics and Computational Biology.
  ☆95Updated last year
• lingxusb / Riboformer
  ☆22Updated 4 months ago
• calico / borzoi
  RNA-seq prediction with deep convolutional neural networks.
  ☆197Updated last month
• gpp-rnd / rs3
  Package to Score Sequences using Rule Set 3
  ☆12Updated 2 weeks ago
• IndexThePlanet / Logan
  Logan Unitigs and Contigs
  ☆171Updated 3 weeks ago
• linsalrob / ComputationalGenomicsManual
  Robs manual for the computational genomics and bioinformatics class.
  ☆264Updated 10 months ago
• pinellolab / CRISPResso2
  Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments
  ☆318Updated 2 weeks ago
• libnano / primer3-py
  Simple oligo analysis and primer design
  ☆182Updated 3 weeks ago
• RTH-tools / crispron
  CRISPR Cas9 ontarget prediction software
  ☆27Updated 7 months ago
• BioOmics / iSeq
  Download sequencing data and metadata from GSA, SRA, ENA, and DDBJ databases.
  ☆214Updated this week
• openvax / mhctools
  Python interface to running command-line and web-based MHC binding predictors
  ☆98Updated last year
• htseq / htseq
  HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.
  ☆106Updated 4 months ago
• deeptools / pyBigWig
  A python extension for quick access to bigWig and bigBed files
  ☆234Updated 8 months ago
• mckennalab / FlashFry
  FlashFry: The rapid CRISPR target site characterization tool
  ☆78Updated last year
• lmdu / pyfastx
  a python package for fast random access to sequences from plain and gzipped FASTA/Q files
  ☆289Updated 9 months ago
• jmschrei / tfmodisco-lite
  A lite implementation of tfmodisco, a motif discovery algorithm for genomics experiments.
  ☆84Updated 2 weeks ago
• ablab / IsoQuant
  Transcript discovery and quantification with long RNA reads (Nanopores and PacBio)
  ☆185Updated last week