zaneveld / full_spectrum_bioinformatics
An open-access bioinformatics text
☆112Updated 2 weeks ago
Alternatives and similar repositories for full_spectrum_bioinformatics:
Users that are interested in full_spectrum_bioinformatics are comparing it to the libraries listed below
- Example genomics data for tool developers☆112Updated 9 months ago
- Bioinformatics Workbook repository☆183Updated last week
- An easy-to-use workflow for generating context specific genome-scale metabolic models and predicting metabolic interactions within micro…☆235Updated 8 months ago
- Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, e…☆243Updated last week
- repository of the 3-day course "First steps with Python in Life Sciences" from SIB-training☆59Updated last month
- Python library for array programming on biological datasets. Documentation available at: https://bionumpy.github.io/bionumpy/☆280Updated this week
- This repository contains math tutorials I created for Bioinformatics and Computational Biology.☆88Updated 8 months ago
- Using Deep Learning to predict gene annotations☆188Updated 2 weeks ago
- Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.☆376Updated last year
- Informed prediction and analysis of bacterial metabolic pathways and genome-scale networks☆178Updated this week
- a python package for fast random access to sequences from plain and gzipped FASTA/Q files☆278Updated 4 months ago
- Logan Unitigs and Contigs☆127Updated 2 weeks ago
- Analyze your RNA sequencing data without writing a single line of code☆132Updated 2 months ago
- course material☆126Updated 2 years ago
- antiSMASH☆201Updated 2 weeks ago
- A curated list of awesome nanopore analysis tools.☆263Updated 8 months ago
- ATLAS - Three commands to start analyzing your metagenome data☆386Updated last month
- ☆125Updated 7 months ago
- Package for fetching metadata and downloading data from SRA/ENA/GEO☆326Updated 2 months ago
- Align proteins to genomes with splicing and frameshift☆358Updated last week
- Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes☆277Updated 3 weeks ago
- Webserver and command line tool for annotating engineered plasmids☆117Updated last month
- Nextflow training material☆162Updated this week
- Nanopore demultiplexing, QC and alignment pipeline☆198Updated last week
- Similarity networks of biosynthetic gene clusters☆108Updated last week
- A user-friendly workflow for phylogenomics☆210Updated this week
- Tool to plot synteny and structural rearrangements between genomes☆303Updated 2 weeks ago
- CAMISIM: Simulating metagenomes and microbial communities☆203Updated 8 months ago
- Discovering known and novel miRNAs from small RNA sequencing data☆147Updated 7 months ago
- Download FASTQ files from SRA or ENA repositories.☆320Updated last month