kyamagu / sge-gpuprologLinks
Scripts to manage NVIDIA GPU devices in SGE 6.2u5
☆25Updated 3 years ago
Alternatives and similar repositories for sge-gpuprolog
Users that are interested in sge-gpuprolog are comparing it to the libraries listed below
Sorting:
- Reimplementation of the UniRep protein featurization model.☆108Updated last year
- ☆20Updated 4 years ago
- Interpretable genotype-phenotype landscape modeling☆36Updated 2 years ago
- ☆36Updated 6 years ago
- Code for the MSB publication: Exploring amino acid functions and positional subtypes in a deep mutational landscape☆11Updated 3 years ago
- A COBRApy extension for genome-scale models of metabolism and expression (ME-models)☆35Updated 6 years ago
- Open Source Protein REdesign for You v3☆56Updated 3 weeks ago
- Pseudo Likelihood Maximization for protein in Julia☆51Updated 6 months ago
- End-to-end deep learning toolkit for predicting protein binding sites and motifs.☆45Updated 6 years ago
- Automated omics-scale protein modeling and simulation setup.☆53Updated 4 years ago
- Tools for munging genomic data☆21Updated 6 years ago
- ☆52Updated 5 years ago
- Neural networks for amino acid sequences☆21Updated 7 years ago
- Methods for mapping genomic data onto 3D protein structure.☆28Updated 3 years ago
- PyTorch library of layers acting on protein representations☆119Updated last year
- ☆40Updated 7 years ago
- Visually explore covariation in protein families☆40Updated 6 years ago
- ☆134Updated 3 years ago
- Dynamic Flux Balance analysis in Python☆11Updated 9 years ago
- De novo protein structure prediction using iteratively predicted structural constraints☆60Updated 3 years ago
- ☆25Updated 3 years ago
- Stochastic Sequence Propagation - A Keras Model for optimizing DNA, RNA and protein sequences based on a predictor☆50Updated last year
- retrieve protein sequence identifiers and metadata from http://uniprot.org☆68Updated 4 years ago
- Analysis and figure code from Alley et al. 2019.☆59Updated 2 years ago
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…☆66Updated 3 years ago
- ERGO is a deep learing based model for predicting TCR-peptide binding.☆18Updated 3 years ago
- Learning structural motif representations for efficient protein structure search☆19Updated 8 years ago
- Train an Amino Acid Embeddings (or a dragon?)☆17Updated 8 years ago
- ☆94Updated 6 years ago
- Python Bioinformatics Toolkit for CATH (Protein Classification Database @ UCL)☆15Updated last year